c295ff853919b7046caca525927f4856ff775622
chinhli
  Wed Dec 12 11:19:34 2012 -0800
Track #9269 ExonJunction Primers displayed as a bedDetail track.
diff --git src/hg/inc/exonJunctionPrimers.h src/hg/inc/exonJunctionPrimers.h
new file mode 100644
index 0000000..caaa1a3
--- /dev/null
+++ src/hg/inc/exonJunctionPrimers.h
@@ -0,0 +1,70 @@
+/* exonJunctionPrimers.h was originally generated by the autoSql program, which also 
+ * generated exonJunctionPrimers.c and exonJunctionPrimers.sql.  This header links the database and
+ * the RAM representation of objects. */
+
+#ifndef EXONJUNCTIONPRIMERS_H
+#define EXONJUNCTIONPRIMERS_H
+
+#define EXONJUNCTIONPRIMERS_NUM_COLS 14
+
+struct exonJunctionPrimers
+/* Browser extensible data, with extended fields for detail page */
+    {
+    struct exonJunctionPrimers *next;  /* Next in singly linked list. */
+    char *chrom;	/* Reference sequence chromosome or scaffold */
+    unsigned chromStart;	/* Start position in chromosome */
+    unsigned chromEnd;	/* End position in chromosome */
+    char *name;	/* Short Name of item */
+    unsigned score;	/* Score from 0-1000 */
+    char strand[2];	/* + or - */
+    unsigned thickStart;	/* Start of where display should be thick (start codon) */
+    unsigned thickEnd;	/* End of where display should be thick (stop codon) */
+    unsigned reserved;	/* Used as itemRgb as of 2004-11-22 */
+    int blockCount;	/* Number of blocks */
+    int *blockSizes;	/* Comma separated list of block sizes */
+    int *chromStarts;	/* Start positions relative to chromStart */
+    char *id;	/* ID to bed used in URL to link back */
+    char *description;	/* Long description of item for the details page */
+    };
+
+struct exonJunctionPrimers *exonJunctionPrimersLoad(char **row);
+/* Load a exonJunctionPrimers from row fetched with select * from exonJunctionPrimers
+ * from database.  Dispose of this with exonJunctionPrimersFree(). */
+
+struct exonJunctionPrimers *exonJunctionPrimersLoadAll(char *fileName);
+/* Load all exonJunctionPrimers from whitespace-separated file.
+ * Dispose of this with exonJunctionPrimersFreeList(). */
+
+struct exonJunctionPrimers *exonJunctionPrimersLoadAllByChar(char *fileName, char chopper);
+/* Load all exonJunctionPrimers from chopper separated file.
+ * Dispose of this with exonJunctionPrimersFreeList(). */
+
+#define exonJunctionPrimersLoadAllByTab(a) exonJunctionPrimersLoadAllByChar(a, '\t');
+/* Load all exonJunctionPrimers from tab separated file.
+ * Dispose of this with exonJunctionPrimersFreeList(). */
+
+struct exonJunctionPrimers *exonJunctionPrimersCommaIn(char **pS, struct exonJunctionPrimers *ret);
+/* Create a exonJunctionPrimers out of a comma separated string. 
+ * This will fill in ret if non-null, otherwise will
+ * return a new exonJunctionPrimers */
+
+void exonJunctionPrimersFree(struct exonJunctionPrimers **pEl);
+/* Free a single dynamically allocated exonJunctionPrimers such as created
+ * with exonJunctionPrimersLoad(). */
+
+void exonJunctionPrimersFreeList(struct exonJunctionPrimers **pList);
+/* Free a list of dynamically allocated exonJunctionPrimers's */
+
+void exonJunctionPrimersOutput(struct exonJunctionPrimers *el, FILE *f, char sep, char lastSep);
+/* Print out exonJunctionPrimers.  Separate fields with sep. Follow last field with lastSep. */
+
+#define exonJunctionPrimersTabOut(el,f) exonJunctionPrimersOutput(el,f,'\t','\n');
+/* Print out exonJunctionPrimers as a line in a tab-separated file. */
+
+#define exonJunctionPrimersCommaOut(el,f) exonJunctionPrimersOutput(el,f,',',',');
+/* Print out exonJunctionPrimers as a comma separated list including final comma. */
+
+/* -------------------------------- End autoSql Generated Code -------------------------------- */
+
+#endif /* EXONJUNCTIONPRIMERS_H */
+