09921e9de96b4d941964c303420b339eb71a1a56 donnak Thu Dec 20 12:49:15 2012 -0800 Moved tree shrew info in news item. diff --git src/hg/htdocs/indexNews.html src/hg/htdocs/indexNews.html index a5027f0..ceed9b3 100755 --- src/hg/htdocs/indexNews.html +++ src/hg/htdocs/indexNews.html @@ -43,38 +43,35 @@ <LI> <b>Bushbaby</b> (<em>Otolemur garnettii</em>) <b>otoGar3</b> – OtoGar3 (Mar. 2011) from the Broad Institute <LI> <b>Chimpanzee</b> (<em>Pan troglodytes</em>) <b>panTro4</b> – Build 2.1.4 (Feb. 2011) from the Chimpanzee Genome Sequencing Consortium <LI> <b>Gibbon</b> (<em>Nomascus leucogenys</em>) <b> nomLeu2</b> – Nleu1.1 (Jun. 2011) from the Gibbon Genome Sequencing Consortium <LI> <b>Mouse lemur</b> (<em>Microcebus murinus</em>) <b>micMur1</b> – MicMur1.0 (Jul. 2007) from the Broad Institute <LI> <b>Rhesus macaque</b> (<em>Macaca mulatta</em>) <b>rheMac3</b> – CR_1.0 (Oct. 2010) from the Beijing Genomics Institute - <LI> <b>Squirrel monkey</b> (<em>Saimiri boliviensis boliviensis</em>) <b>saiBol1</b>– - SaiBol1.0 (Oct. 2011) from the Broad Institute + <LI> <b>Squirrel monkey</b> (<em>Saimiri boliviensis boliviensis</em>) + <b>saiBol1</b>– SaiBol1.0 (Oct. 2011) from the Broad Institute <LI> <b>Tarsier</b> (<em>Tarsius syrichta</em>) <b>tarSyr1</b> – Tarsyr1.0 (Aug. 2008) from WUSTL and the Broad Institute - - <LI> <b>Tree shrew</b> (<em>Tupaia belangeri</em>) <b>tupBel1</b> – - Tupbel1.0 (Dec. 2006) from the Broad Institute </UL> </p> <p> <b><em>Other mammals:</em></b> <UL> <LI> <b>Alpaca</b> (<em>Vicugna pacos</em>) <b>vicPac1</b> – VicPac1.0 (Jul. 2008) from the Broad Institute <LI> <b>Armadillo</b> (<em>Dasypus novemcinctu</em>) <b>dasNov3</b> – DasNov3 (Dec. 2011) from the Broad Institute <LI> <b>Cat</b> (<em>Felis catus</em>) <b>felCat5</b> – Felis_catus-6.2 (Sep. 2011) from the International Cat Genome Sequencing Consortium <LI> <b>Dolphin</b> (<em>Tursiops truncatus</em>) <b>turTru2</b> – @@ -95,35 +92,38 @@ <LI> <b>Naked mole rat</b> (<em>Heterocephalus glaber</em>) <b>hetGla2</b> – HetGla_female_1.0 (Jan. 2012) from the Broad Institute <LI> <b>Pig</b> (<em>Sus scrofa</em>) <b>susScr3</b> – Sscrofa10.2 (Aug. 2011) from the Swine Genome Sequencing Consortium <LI> <b>Pika</b> (<em>Ochotona princeps</em>) <b>ochPri2</b> – OchPri2 (Jul. 2008) from the Broad Institute <LI> <b>Rock hyrax</b> (<em>Procavia capensis</em>) <b>proCap1</b> – Procap1.0 (Jul. 2008) from the Baylor College of Medicine HGSC <LI> <b>Shrew</b> (<em>Sorex araneus</em>) <b>sorAra1</b> – SorAra1.0 (Jun. 2006) from the Broad Institute - <LI> <b>Sloth</b> (<em>Choloepus ooffmanni</em>) <b>choHof1</b> – + <LI> <b>Sloth</b> (<em>Choloepus hoffmanni</em>) <b>choHof1</b> – ChoHof1.0 (Jul. 2008) from the Broad Institute <LI> <b>Squirrel</b> (<em>Spermophilus tridecemlineatus</em>) <b>speTri2</b> – SpeTri2.0 (Nov. 2011) from the Broad Institute + + <LI> <b>Tree shrew</b> (<em>Tupaia belangeri</em>) <b>tupBel1</b> – + Tupbel1.0 (Dec. 2006) from the Broad Institute </UL> </p> <p> <b><em>Other vertebrates:</em></b> <UL> <LI> <B>Atlantic cod</b> (<em>Gadus morhua</em>) <b>gadMor1</b> – GadMor_May2010 (May 2010) from Genofisk <LI> <B>Budgerigar</b> (<em>Melopsittacus undulatus</em>) <b>melUnd1</b> – v6.3 (Sep. 2011) from WUSTL <LI> <B>Coelacanth</b> (<em>Latimeria chalumnae</em>) <b>latCha1</b> – LatCha1 (Aug. 2011) from the Broad Institute <LI> <B>Nile tilapia</b> (<em>Oreochromis niloticus</em>) <b>oreNil2</b> – @@ -141,31 +141,31 @@ <a href="http://hgdownload.cse.ucsc.edu/downloads.html">downloads</a> page. </p> <p> We regret that we don't have the resources to support the many other genomics research communities who would like us to visualize their data in our browser. However, we can provide you with information for setting up your own browser or track hub to display your data, as well as links to other visualization resources on the web that are specific to your genome of interest. Feel free to contact our <a href="mailto:genome@soe.ucsc.edu">mail list</a> for more information. </p> <p> *Lindblad-Toh K <em>et al</em>. <a href="http://www.nature.com/nature/journal/v478/n7370/full/nature10530.html" target="_blank">A high-resolution map of human evolutionary constraint using 29 - mammals</a>. <em>Nature</em> 2011 Oct 12;478(7370):476-82. + mammals</a>. <em>Nature</em>. 2011 Oct 12;478(7370):476-82. </p> <p> <hr> <font face="courier" size="3"><b>14 December 2012 - Reduced Coverage During the Holidays</b></font> <p> The UCSC campus will be closed for the holidays from December 22, 2012 through January 1, 2013. The Genome Browser will still be available; however, our backup systems will be offline for two days, December 27 and 28. During this time if we experience any issues, associated fixes are likely to be delayed. The help desk will also be minimally staffed during this period. We will be monitoring the mailing lists for urgent messages, but the bulk of the questions will go unanswered until early January. </p>