Commits for kate

v277_base to v278_preview (2012-12-18 to 2013-01-08) v278

• New make doc for ENCODE analysis tracks
  • src/hg/makeDb/doc/encodeAwgHg19/make.txt - lines changed 13, context: html, text, full: html, text
• Rename
  • src/hg/makeDb/doc/encodeAwgHg19/awg.txt - lines changed 13, context: html, text, full: html, text
• Rename
  • src/hg/makeDb/doc/encodeAwgHg19/make.txt - lines changed 13, context: html, text, full: html, text
• Rename
  • src/hg/makeDb/doc/encodeAwgHg19/make.txt - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change shows no diff)
• Remove Updated notice on ENCODE portal
  • src/hg/htdocs/ENCODE/index.html - lines changed 1, context: html, text, full: html, text
• First cut trackDb and HTML for AWG Dnase track
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeAwgDnase.ra - lines changed 910, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeAwgDnaseUniPk.html - lines changed 59, context: html, text, full: html, text
• Prune shortLabels to 17
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeAwgDnase.ra - lines changed 14, context: html, text, full: html, text
• ENCODE Analysis DNase I HS from uniform pipeline. Track #9850
  • src/hg/makeDb/doc/encodeAwgHg19/.awg.txt.swp - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change shows no diff)
  • src/hg/makeDb/doc/encodeAwgHg19/awg.txt - lines changed 142, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/cv/alpha/cv.ra - lines changed 12, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/makefile - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeAwgDnase.ra - lines changed 1854, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeAwgDnase.ra - lines changed 128, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeDNAseSuper.html - lines changed 4, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromChip.release2.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromDnase.release3.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromFaire.release2.ra - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromSynth.release2.ra - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDgf.release4.ra - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDnase.release6.ra - lines changed 2, context: html, text, full: html, text
• ENCODE Analysis DNase I HS from uniform pipeline. Track #9850
  • src/hg/makeDb/trackDb/human/hg19/trackDb.wgEncode.ra - lines changed 3, context: html, text, full: html, text
• Merge branch 'master' into awg
• Adjust ENCODE DNase track ordering
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeAwgDnase.ra - lines changed 4, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromDnase.release3.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromFaire.release2.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeOpenChromSynth.release2.ra - lines changed 3, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDgf.release4.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeUwDnase.release6.ra - lines changed 1, context: html, text, full: html, text