71ff013434802be9c932f9c86718bf3ad1fdd981
kate
  Fri Jan 11 15:57:28 2013 -0800
Trim unneeded experiment accession from supplementary table.  #9554 ENCODE Regulation: DNase Clusters V2
diff --git src/hg/lib/clusterInputAwgDnase.c src/hg/lib/clusterInputAwgDnase.c
new file mode 100644
index 0000000..f5ee458
--- /dev/null
+++ src/hg/lib/clusterInputAwgDnase.c
@@ -0,0 +1,139 @@
+/* clusterInputAwgDnase.c was originally generated by the autoSql program, which also 
+ * generated clusterInputAwgDnase.h and clusterInputAwgDnase.sql.  This module links the database and
+ * the RAM representation of objects. */
+
+#include "common.h"
+#include "linefile.h"
+#include "dystring.h"
+#include "jksql.h"
+#include "clusterInputAwgDnase.h"
+
+
+void clusterInputAwgDnaseStaticLoad(char **row, struct clusterInputAwgDnase *ret)
+/* Load a row from clusterInputAwgDnase table into ret.  The contents of ret will
+ * be replaced at the next call to this function. */
+{
+
+ret->tableName = row[0];
+ret->cellType = row[1];
+ret->treatment = row[2];
+ret->lab = row[3];
+}
+
+struct clusterInputAwgDnase *clusterInputAwgDnaseLoad(char **row)
+/* Load a clusterInputAwgDnase from row fetched with select * from clusterInputAwgDnase
+ * from database.  Dispose of this with clusterInputAwgDnaseFree(). */
+{
+struct clusterInputAwgDnase *ret;
+
+AllocVar(ret);
+ret->tableName = cloneString(row[0]);
+ret->cellType = cloneString(row[1]);
+ret->treatment = cloneString(row[2]);
+ret->lab = cloneString(row[3]);
+return ret;
+}
+
+struct clusterInputAwgDnase *clusterInputAwgDnaseLoadAll(char *fileName) 
+/* Load all clusterInputAwgDnase from a whitespace-separated file.
+ * Dispose of this with clusterInputAwgDnaseFreeList(). */
+{
+struct clusterInputAwgDnase *list = NULL, *el;
+struct lineFile *lf = lineFileOpen(fileName, TRUE);
+char *row[4];
+
+while (lineFileRow(lf, row))
+    {
+    el = clusterInputAwgDnaseLoad(row);
+    slAddHead(&list, el);
+    }
+lineFileClose(&lf);
+slReverse(&list);
+return list;
+}
+
+struct clusterInputAwgDnase *clusterInputAwgDnaseLoadAllByChar(char *fileName, char chopper) 
+/* Load all clusterInputAwgDnase from a chopper separated file.
+ * Dispose of this with clusterInputAwgDnaseFreeList(). */
+{
+struct clusterInputAwgDnase *list = NULL, *el;
+struct lineFile *lf = lineFileOpen(fileName, TRUE);
+char *row[4];
+
+while (lineFileNextCharRow(lf, chopper, row, ArraySize(row)))
+    {
+    el = clusterInputAwgDnaseLoad(row);
+    slAddHead(&list, el);
+    }
+lineFileClose(&lf);
+slReverse(&list);
+return list;
+}
+
+struct clusterInputAwgDnase *clusterInputAwgDnaseCommaIn(char **pS, struct clusterInputAwgDnase *ret)
+/* Create a clusterInputAwgDnase out of a comma separated string. 
+ * This will fill in ret if non-null, otherwise will
+ * return a new clusterInputAwgDnase */
+{
+char *s = *pS;
+
+if (ret == NULL)
+    AllocVar(ret);
+ret->tableName = sqlStringComma(&s);
+ret->cellType = sqlStringComma(&s);
+ret->treatment = sqlStringComma(&s);
+ret->lab = sqlStringComma(&s);
+*pS = s;
+return ret;
+}
+
+void clusterInputAwgDnaseFree(struct clusterInputAwgDnase **pEl)
+/* Free a single dynamically allocated clusterInputAwgDnase such as created
+ * with clusterInputAwgDnaseLoad(). */
+{
+struct clusterInputAwgDnase *el;
+
+if ((el = *pEl) == NULL) return;
+freeMem(el->tableName);
+freeMem(el->cellType);
+freeMem(el->treatment);
+freeMem(el->lab);
+freez(pEl);
+}
+
+void clusterInputAwgDnaseFreeList(struct clusterInputAwgDnase **pList)
+/* Free a list of dynamically allocated clusterInputAwgDnase's */
+{
+struct clusterInputAwgDnase *el, *next;
+
+for (el = *pList; el != NULL; el = next)
+    {
+    next = el->next;
+    clusterInputAwgDnaseFree(&el);
+    }
+*pList = NULL;
+}
+
+void clusterInputAwgDnaseOutput(struct clusterInputAwgDnase *el, FILE *f, char sep, char lastSep) 
+/* Print out clusterInputAwgDnase.  Separate fields with sep. Follow last field with lastSep. */
+{
+if (sep == ',') fputc('"',f);
+fprintf(f, "%s", el->tableName);
+if (sep == ',') fputc('"',f);
+fputc(sep,f);
+if (sep == ',') fputc('"',f);
+fprintf(f, "%s", el->cellType);
+if (sep == ',') fputc('"',f);
+fputc(sep,f);
+if (sep == ',') fputc('"',f);
+fprintf(f, "%s", el->treatment);
+if (sep == ',') fputc('"',f);
+fputc(sep,f);
+if (sep == ',') fputc('"',f);
+fprintf(f, "%s", el->lab);
+if (sep == ',') fputc('"',f);
+fputc(lastSep,f);
+}
+
+/* -------------------------------- End autoSql Generated Code -------------------------------- */
+