Commits for angie

v279_preview to v279_preview2 (2013-01-29 to 2013-02-05) v279

• Ran hg19-panTro4 for user, using same params as for panTro3.
  • src/hg/makeDb/doc/hg19.txt - lines changed 60, context: html, text, full: html, text
• Code Review #10076 - Undoing much of e92495a7 because Tim made me lookagain at why I was getting the composite back from tdbForTrack.
  
  • src/hg/hgVarAnnogrator/hgVarAnnogrator.c - lines changed 6, context: html, text, full: html, text
  • src/hg/inc/hdb.h - lines changed 6, context: html, text, full: html, text
  • src/hg/lib/hdb.c - lines changed 7, context: html, text, full: html, text
• Track #7043 (SNPs for mm10): Moved up search specs for snp137 to top-level trackDb.ra for sharing with mouse. (Thanks Luvina!)
  • src/hg/makeDb/trackDb/human/hg19/trackDb.ra - lines changed 32, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/trackDb.ra - lines changed 32, context: html, text, full: html, text
• Track #10098 (GWAS Catalog): bimonthly update.
  • src/hg/makeDb/doc/hg18.txt - lines changed 4, context: html, text, full: html, text
  • src/hg/makeDb/doc/hg19.txt - lines changed 40, context: html, text, full: html, text
• Native VCF tracks don't have bigDataUrl & need a proper call to bbiNameFromSettingOrTableChrom.
  • src/hg/hgVarAnnogrator/hgVarAnnogrator.c - lines changed 26, context: html, text, full: html, text
• Javascript robustness: added "use strict" as suggested by Brian C; added pragmas for jslint and got jslint to pass again.
  • src/hg/js/hgVarAnnogrator.js - lines changed 104, context: html, text, full: html, text