Commits for chinhli

v279_preview to v279_preview2 (2013-01-29 to 2013-02-05) v279

• Track #8533 NumtS tracks: Add logic to numtsClick.c to handle the shortened name in 'numtSMitochondrion' table. For example, old NumtS data for or hg18, hg19 and mm9 have name like Mms_NumtS_096_b1, and all new species like dog and cow now have a shorten name like 'SS_NumtS_246')
  • src/hg/hgc/numtsClick.c - lines changed 8, context: html, text, full: html, text
• Assembly #6352 Rename musPut1 to musFur1.
  • src/hg/utils/automation/EnsGeneAutomate.pm - lines changed 3, context: html, text, full: html, text
• Track #8533 Add search rules for NumtS tables for susScr2.
  • src/hg/makeDb/trackDb/pig/susScr2/trackDb.ra - lines changed 24, context: html, text, full: html, text
• Track #8533: Description file for susScr2's NumtS tracks.
  • src/hg/makeDb/trackDb/pig/susScr2/numtSeqSusScr2.html - lines changed 77, context: html, text, full: html, text
• Track #8533: Description file for susScr2's NumtS tracks.
  • src/hg/makeDb/doc/susScr2.txt - lines changed 5, context: html, text, full: html, text
• Change the department in Italian to English.
  • src/hg/makeDb/trackDb/pig/susScr2/numtSeqSusScr2.html - lines changed 4, context: html, text, full: html, text
• Track #9407: Ensembl Genes v70 update.
  • src/hg/utils/automation/EnsGeneAutomate.pm - lines changed 200, context: html, text, full: html, text
• Track #9407: Ensembl Genes v70 update corrected choHof1 type.
  • src/hg/utils/automation/EnsGeneAutomate.pm - lines changed 1, context: html, text, full: html, text
• Track #9407 Ensembl Genes v70 update ra file for felCat5 and rn5.
  • src/hg/utils/automation/ensGene/felCat5.ensGene.ra - lines changed 9, context: html, text, full: html, text
  • src/hg/utils/automation/ensGene/rn5.ensGene.ra - lines changed 7, context: html, text, full: html, text
• Track 9407 ensembl v70 update: Database name Typo corrected.
  • src/hg/utils/automation/ensGene/felCat5.ensGene.ra - lines changed 1, context: html, text, full: html, text
• Track #9407 Add gadMor1 to v70 list.
  • src/hg/utils/automation/ensGene/gadMor1.ensGene.ra - lines changed 9, context: html, text, full: html, text