Commits for kent

v279_preview to v279_preview2 (2013-01-29 to 2013-02-05) v279

• Removing extranious blank line.
  • src/hg/oneShot/freen/freen.c - lines changed 1, context: html, text, full: html, text
• Improving way unused monomers get inserted back in output a little.
  • src/kehayden/alphaAsm/alphaAsm.c - lines changed 47, context: html, text, full: html, text
• Removing some debugging code.
  • src/kehayden/alphaAsm/alphaAsm.c - lines changed 10, context: html, text, full: html, text
• Making random seed default to 0 rather than time to make results more reproducible. Adding in a NULL check to avoid a seg fault.
  • src/kehayden/alphaAsm/alphaAsm.c - lines changed 6, context: html, text, full: html, text