Commits for kate

v281_preview2 to v281_base (2013-03-19 to 2013-03-25) v281

• Warn users off ENCODE HudsonAlpha Methyl450 track due to data problems (ML #10231). It will be replaced by a hub. #10447
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeHaibMethyl450.html - lines changed 5, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeHaibMethyl450.ra - lines changed 1, context: html, text, full: html, text
• Adding metadata to makefile. #10042: ENCODE Uniform TFBS
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/makefile - lines changed 1, context: html, text, full: html, text
• Add download file md5sums to track metadata. refs #10042
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeAwgTfbsUniform.ra - lines changed 695, context: html, text, full: html, text
• Add missing HAIB GM12878 Egr-1 to metadata. It had no Rep1 so was dropped. refs #10042 ENCODE Uniform TFBS
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeAwgTfbsUniform.ra - lines changed 18, context: html, text, full: html, text
• Add HAIB GM12878 EGR1 dataset. refs #10042 . ENCODE Uniform TFBS track
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeAwgTfbsUniform.ra - lines changed 221, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeAwgTfbsUniform.ra - lines changed 7, context: html, text, full: html, text
• Add composite to metadata. refs #10042. ENCODE Uniform TFBS track
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeAwgTfbsUniform.ra - lines changed 5, context: html, text, full: html, text
• Add back missing dataset (HAIB GM12878 Egr-1). refs #10042. ENCODE Uniform TFBS track
  • src/hg/makeDb/doc/encodeAwgHg19.txt - lines changed 43, context: html, text, full: html, text
• Merge branch 'awgTfbs'
• Tweak long label for added dataset. refs #10042. ENCODE Uniform TFBS track.
  • src/hg/makeDb/doc/encodeAwgHg19.txt - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeAwgTfbsUniform.ra - lines changed 1, context: html, text, full: html, text
• Add composite to metadata. refs #10042. ENCODE Uniform TFBS track
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeAwgTfbsUniform.ra - lines changed 6, context: html, text, full: html, text
• One more try at adding composite to metadata. refs #10042. ENCODE Uniform TFBS track.
  • src/hg/makeDb/trackDb/human/hg19/metaDb/alpha/wgEncodeAwgTfbsUniform.ra - lines changed 6, context: html, text, full: html, text
• Revisions to track description from Anshul. refs #10042. ENCODE Uniform TFBS track
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeAwgTfbsUniform.html - lines changed 92, context: html, text, full: html, text
• Fix up tier designations on cell types. Other settings tweaks. refs #10042. ENCODE Uniform TFBS track
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeAwgTfbsUniform.ra - lines changed 538, context: html, text, full: html, text
• Formatting track description. refs #10042. ENCODE Uniform TFBS track.
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeAwgTfbsUniform.html - lines changed 11, context: html, text, full: html, text
• Adding notes file required for ENCODE QA. refs #10042. ENCODE Uniform TFBS
  • src/hg/makeDb/doc/encodeDccHg19/wgEncodeAwgTfbsUniform.release1.notes - lines changed 1428, context: html, text, full: html, text
• Adding notes file required for ENCODE QA. refs #10042. ENCODE Uniform TFBS
  • src/hg/makeDb/doc/encodeAwgHg19.txt - lines changed 1, context: html, text, full: html, text