d5b410116f3c833b657498266654ed3a8281ba71
kent
  Tue Mar 19 22:25:54 2013 -0700
Turning a warning down a notch.
diff --git src/lib/gff.c src/lib/gff.c
index 01baa4b..ccbc43c 100644
--- src/lib/gff.c
+++ src/lib/gff.c
@@ -234,31 +234,31 @@
        gl->intronId = gffFileGetStr(gff, val);
    else if (sameString("intron_status", type))
        gl->intronStatus = gffFileGetStr(gff, val);
    else if (sameString("protein_id", type))
        gl->proteinId = gffFileGetStr(gff, val);
    else if (sameString("gene_name", type))
        gl->geneName = gffFileGetStr(gff, val);
    else if (sameString("transcript_name", type))
        gl->transcriptName = gffFileGetStr(gff, val);
    }
 if (gl->group == NULL)
     {
     if (gl->geneId != NULL)
         addGroup(gff, gl, gl->geneId);
     else
-        warn("No gene_id or transcript_id line %d of %s", lineIx, fileName);
+        verbose(2, "No gene_id or transcript_id line %d of %s", lineIx, fileName);
     }
 }
 
 void gffFileAddRow(struct gffFile *gff, int baseOffset, char *words[], int wordCount, 
     char *fileName, int lineIx)
 /* Process one row of GFF file (a non-comment line parsed by tabs normally). */
 {
 struct hashEl *hel;
 struct gffLine *gl;
 
 if (wordCount < 8)
     gffSyntaxError(fileName, lineIx, "Word count less than 8 ");
 AllocVar(gl);
 
 if ((hel = hashLookup(gff->seqHash, words[0])) == NULL)