6f54bfe3b5b67c6bee0faea36bde8afd2867b280 kent Fri Mar 22 13:29:18 2013 -0700 Adding gffToBed to build diff --git src/hg/utils/makefile src/hg/utils/makefile index c2c9218..00befb5 100644 --- src/hg/utils/makefile +++ src/hg/utils/makefile @@ -1,76 +1,77 @@ # Build all directories in utils # test comment # $Id: makefile,v 1.21 2010/06/04 00:12:42 larrym Exp $ include ../../inc/common.mk SCRIPT_FILES = \ dumpDb.pl \ mergeOverlapBed4.pl # List of directories to build USE_DIRS = $(DIRS) DIRS = \ bedToPsl \ bedExtendRanges \ bedWeedOverlapping \ chromGraphFromBin \ chromGraphToBin \ crTreeIndexBed \ crTreeSearchBed \ gapToLift \ hubCheck hubPublicCheck \ makeTableList \ oligoMatch \ positionalTblCheck \ safePush \ toDev64 \ twoBitMask \ gff3ToGenePred \ gff3ToPsl \ + gffToBed \ gtfToGenePred \ automation \ refreshNamedSessionCustomTracks \ refSeqGet \ tdbQuery \ wigBedToStep \ overlapSelect \ pslMap \ pslUniq \ makeTrackIndex \ geoMirrorNode TEST_DIRS = \ gff3ToGenePred \ gff3ToPsl \ gtfToGenePred \ overlapSelect \ pslMap \ refSeqGet all:: utils utils: $(USE_DIRS:%=%.utils) %.utils: (cd $* && $(MAKE)) scripts: $(SCRIPT_FILES:%=%.scripts) %.scripts: chmod +x $* rm -f ${SCRIPTS}/$* cp -p $* ${SCRIPTS}/$* alpha: scripts all test:: ${TEST_DIRS:%=%.test} %.test: (cd $* && ${MAKE} test) clean:: $(USE_DIRS:%=%.clean) - find . -name '*.o' -exec rm {} \; %.clean: (cd $* && ${MAKE} clean)