06f2bf615ba520ed27b64c930616c3e12dd0cdd1 kent Fri Feb 15 16:07:50 2013 -0800 Moving bwgCreate prototype to bwgInternal to fix compiler warning. diff --git src/inc/bwgInternal.h src/inc/bwgInternal.h index fab20ab..feb1521 100644 --- src/inc/bwgInternal.h +++ src/inc/bwgInternal.h @@ -98,16 +98,21 @@ struct bwgSection *bwgParseWig( char *fileName, /* Name of ascii wig file. */ boolean clipDontDie, /* Skip items outside chromosome rather than aborting. */ struct hash *chromSizeHash, /* If non-NULL items checked to be inside chromosome. */ int maxSectionSize, /* Biggest size of a section. 100 - 100,000 is usual range. */ struct lm *lm); /* Memory pool to allocate from. */ /* Parse out ascii wig file - allocating memory in lm. */ int bwgAverageResolution(struct bwgSection *sectionList); /* Return the average resolution seen in sectionList. */ struct bbiSummary *bwgReduceSectionList(struct bwgSection *sectionList, struct bbiChromInfo *chromInfoArray, int reduction); /* Return summary of section list reduced by given amount. */ +void bwgCreate(struct bwgSection *sectionList, struct hash *chromSizeHash, + int blockSize, int itemsPerSlot, boolean doCompress, char *fileName); +/* Create a bigWig file out of a sorted sectionList. A lower level routine + * than the one above. */ + #endif /* BIGWIGFILE_H */