dabaa1a9094f8191c4d887c47e4202d00d25d289
hiram
  Fri Mar 29 19:18:40 2013 -0700
using new minimal makefile construction refs #9104
diff --git src/cdnaAli/exonAli/makefile src/cdnaAli/exonAli/makefile
index 21baee3..a41fd17 100755
--- src/cdnaAli/exonAli/makefile
+++ src/cdnaAli/exonAli/makefile
@@ -1,15 +1,5 @@
-include ../../inc/common.mk
-
-
-O =  exonAli.o
-
-MYLIBS=../../lib/$(MACHTYPE)/jkOwnLib.a ../../lib/$(MACHTYPE)/jkweb.a -lm
-
-exonAli: $(O)  
-	${CC} ${COPT} ${CFLAGS} -o ${BINDIR}/exonAli $O ${MYLIBS} ${L}
-
-lib: 
-	cd ../../lib && ${MAKE}
-
-clean::
-	rm -f ${O}
+kentSrc = ../..
+A = exonAli
+externObjects = ../lib/cdnaAli.o
+include $(kentSrc)/inc/userApp.mk
+L += ../../lib/$(MACHTYPE)/jkOwnLib.a -lm