dabaa1a9094f8191c4d887c47e4202d00d25d289
hiram
  Fri Mar 29 19:18:40 2013 -0700
using new minimal makefile construction refs #9104
diff --git src/cdnaAli/refineAli/makefile src/cdnaAli/refineAli/makefile
index ea62aa9..420d8d5 100755
--- src/cdnaAli/refineAli/makefile
+++ src/cdnaAli/refineAli/makefile
@@ -1,10 +1,4 @@
-include ../../inc/common.mk
-
-
-O =  refineAli.o
-
-${BINDIR}/refiAli: $(O)  
-	${CC} ${COPT} ${CFLAGS} -o ${BINDIR}/refiAli $O ../../lib/$(MACHTYPE)/jkOwnLib.a ../../lib/$(MACHTYPE)/jkweb.a -lm ${L}
-
-clean::
-	rm -f ${O}
+kentSrc = ../..
+A = refineAli
+include $(kentSrc)/inc/userApp.mk
+L += ../../lib/$(MACHTYPE)/jkOwnLib.a -lm