1f125145fd895b3af8ac849fb7185ee1eb8193a1
hiram
  Fri Mar 29 14:53:26 2013 -0700
adding src/hg/utils link support with jkhgap and mysql libs libraries on conditional refs #9104
diff --git src/inc/userApp.mk src/inc/userApp.mk
index c10f995..ba77919 100644
--- src/inc/userApp.mk
+++ src/inc/userApp.mk
@@ -2,30 +2,33 @@
 # user App rules, typical three-line makefile to use this rule set,
 #   the binary program file name is specified by the 'A' variable:
 #	kentSrc = ../..
 #	A = aveCols
 #	include $(kentSrc)/inc/userApp.mk
 #
 # for more than one object file for the resulting 'A' program, use
 #       extraObjects = second.o third.o fourth.o etc.o
 #
 # to use object files built elsewhere:
 #       externObjects = ../path/other.o
 #
 include $(kentSrc)/inc/common.mk
 
 MYLIBS = $(kentSrc)/lib/$(MACHTYPE)/jkweb.a
+ifeq (${JKHGAPLIB},)
+  MYLIBS += $(kentSrc)/lib/$(MACHTYPE)/jkhgap.a $(MYSQLLIBS)
+endif
 
 O = ${A}.o
 objects = ${O} ${extraObjects} ${externObjects}
 
 all ${A}: ${O} ${extraObjects}
 	${CC} ${COPT} -o ${DESTDIR}${BINDIR}/${A} ${objects} ${MYLIBS} ${L}
 	${STRIP} ${DESTDIR}${BINDIR}/${A}${EXE}
 
 compile: ${O} ${extraObjects} ${MYLIBS}
 	${CC} ${COPT} ${CFLAGS} -o ${A}${EXE} ${objects} ${MYLIBS} ${L}
 
 install:: compile
 	rm -f ${DESTDIR}${BINDIR}/${A}${EXE}
 	cp -p ${A}${EXE} ${DESTDIR}${BINDIR}/${A}${EXE}
 	${STRIP} ${A}${EXE} ${DESTDIR}${BINDIR}/${A}${EXE}