232074610513870c470c1263d3c46ff9b4ac3450 hiram Tue Apr 2 17:22:55 2013 -0700 minimal makefiles now in place for kentUtils build refs #9104 diff --git src/hg/genePredToMafFrames/makefile src/hg/genePredToMafFrames/makefile index 5c5a867..4c8be7e 100644 --- src/hg/genePredToMafFrames/makefile +++ src/hg/genePredToMafFrames/makefile @@ -1,31 +1,20 @@ -include ../../inc/common.mk -HG_WARN = ${HG_WARN_ERR} - -MYLIBDIR = ../../lib/${MACHTYPE} -L += ${MYSQLLIBS} -lm -MYLIBS = ${MYLIBDIR}/jkhgap.a ${MYLIBDIR}/jkweb.a - +kentSrc = ../.. A = genePredToMafFrames -O = orgGenes.o mkMafFrames.o splitMultiMappings.o finishMafFrames.o genePredToMafFrames.o - -genePredToMafFrames: ${O} ${MYLIBS} - ${CC} ${COPT} ${CFLAGS} -o ${DISTDIR}${BINDIR}/${A}${EXE} ${O} ${MYLIBS} $L +extraObjects = orgGenes.o mkMafFrames.o splitMultiMappings.o finishMafFrames.o +include $(kentSrc)/inc/userApp.mk orgGenes.o: orgGenes.h orgGenes.c mkMafFrames.o: mkMafFrames.c mkMafFrames.h orgGenes.h frameIncr.h finishMafFrames.o: finishMafFrames.c finishMafFrames.h orgGenes.h frameIncr.h genePredToMafFrames.o: genePredToMafFrames.c orgGenes.h mkMafFrames.h splitMultiMappings.h finishMafFrames.h splitMultiMappings.o: splitMultiMappings.c splitMultiMappings.h orgGenes.h -compile: ${O} - ${CC} ${COPT} ${CFLAGS} -o ${A}${EXE} ${O} ${MYLIBS} $L - -test: compile - (cd tests && ${MAKE} test) - rm -fr tests/output ${A}${EXE} *.o +test: + cd tests && ${MAKE} test + rm -fr tests/output savebak: savebak genePredToMafFrames *.[ch] makefile tests/makefile tests/input -clean: - rm -fr tests/output ${A}${EXE} *.o +clean:: + rm -fr tests/output