e875e085d0c976ca62b895bdfa5180a942a1854a
aamp
  Thu May 2 14:01:47 2013 -0700
Rolled back some changes to liftOver's presence in the library. If it goes into the top-level maybe it should get some design changes as well.  At the moment the design is a bit stretched.
diff --git src/hg/inc/liftOver.h src/hg/inc/liftOver.h
index 2cd20f7..f501281 100644
--- src/hg/inc/liftOver.h
+++ src/hg/inc/liftOver.h
@@ -1,23 +1,22 @@
 /* lift genome annotations between assemblies using chain files */
 
 #ifndef LIFTOVER_H
 #define LIFTOVER_H
 
-#ifndef LIFTOVERCORE_H
-#include "liftOverCore.h"
-#endif
+#define LIFTOVER_MINMATCH        0.95
+#define LIFTOVER_MINBLOCKS       1.00
 
 enum liftOverFileType
 {
     none = 0,
     bed = 1,
     positions = 2,
 };
 
 struct liftOverChain *liftOverChainList();
 /* Get list of all liftOver chains in the central database */
 
 void filterOutMissingChains(struct liftOverChain **pChainList);
 /* Filter out chains that don't exist.  Helps partially mirrored sites. */
 
 struct liftOverChain *liftOverChainListFiltered();