6c6176de07f6282d2f6fde65e8210a4a8eeef09c hiram Thu May 23 10:30:35 2013 -0700 adjusting README instructions and expanding the fetch operation refs #9104 diff --git src/userApps/README src/userApps/README index b561846..4a1b628 100644 --- src/userApps/README +++ src/userApps/README @@ -8,33 +8,34 @@ Linux/Unix/MacOSX system 'git' source code management: http://git-scm.com/downloads gnu gcc - C code development system - http://www.gnu.org/software/gcc/ gnu make - http://www.gnu.org/software/make/ MySQL development system and libraries libpng libssl ========= 1. Fetch the userApps directory from the kent source: git archive --format=zip -9 \ --remote=git://genome-source.cse.ucsc.edu/kent.git \ HEAD src/userApps > userApps.zip - unzip -q userApps.zip + unzip -d userApps -j userApps.zip - Creates the directory ./userApps/ + Creates the directory: ./userApps/ + with several files. 2. Build utilities: cd userApps make This build fetches (with git) approximately 60 Mb of kent source code, and constructs command binaries of approximately 120 Mb. 3. Install utilities The binaries are built into userApps/bin/ To install them in a global bin/ directory, copy them to desired location: sudo rsync -a -P bin/ /usr/local/bin/userApps/ The destination bin/userApps/ should be its own unique directory