Commits for tdreszer
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v283_base to v284_preview (2013-05-07 to 2013-05-14) v284
- Removing cartBooleanTimeout as disappearing cart variables are not really a good idea at this time.
- Removed cart vars timing out and moved some buttons (conditionally).
- src/hg/lib/haplotypes.c - lines changed 68, context: html, text, full: html, text
- Fixed minor js warning.
- Initial check in of new hgGene section: Gene Alleles. The ra file is not being checked in yet.
- src/hg/hgGene/alleles.c - lines changed 95, context: html, text, full: html, text
- src/hg/hgGene/hgGene.c - lines changed 15, context: html, text, full: html, text
- Major organization changes (suggested by Brooke). Also, less important notes have been moved to a table at the bottom. Decisions should be made as to which of these notes really shoud be in the body of the text.
- src/hg/htdocs/goldenPath/help/haplotypes.html - lines changed 197, context: html, text, full: html, text
- Adding the Gene Alleles section with this one ra file. To prevent it from being released this cycle, merely revoke this one file.
- src/hg/hgGene/hgGeneData/Human/hg19/section.ra - lines changed 9, context: html, text, full: html, text
- A couple of cart vars got screwed up in the last change to no longer support timeout vars.
- src/hg/hgGene/alleles.c - lines changed 1, context: html, text, full: html, text
- Fixed 2 objscure bugs resulting from deletions overlapping each other. Also did some name changing and comment clarification suggested by Angie.
- src/hg/hgGene/alleles.c - lines changed 1, context: html, text, full: html, text
- src/hg/htdocs/goldenPath/help/haplotypes.html - lines changed 1, context: html, text, full: html, text
- src/hg/inc/haplotypes.h - lines changed 7, context: html, text, full: html, text
- src/hg/lib/haplotypes.c - lines changed 204, context: html, text, full: html, text
- Fixed Synonymous variant sorting, changed full sequence and all variant cart vars to global (instead of gene specific) and conditionally added the haplotype ID to a hover message at Kate's request.
- src/hg/hgGene/alleles.c - lines changed 2, context: html, text, full: html, text
- src/hg/lib/haplotypes.c - lines changed 22, context: html, text, full: html, text
- Removed reference to gene specific cart vars which are no longer accurate. Added a note about haplotype IDs which may not be included in the released version.
- src/hg/htdocs/goldenPath/help/haplotypes.html - lines changed 17, context: html, text, full: html, text
- Removed the ID note as not ready for prime time and clarified some wording.
- src/hg/htdocs/goldenPath/help/haplotypes.html - lines changed 13, context: html, text, full: html, text
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