080a160c7b9595d516c9c70e83689a09b60839d0
galt
  Mon Jun 3 12:16:53 2013 -0700
fix SQL Injection
diff --git src/hg/inc/snpExceptions.h src/hg/inc/snpExceptions.h
index 7b9a355..430199c 100644
--- src/hg/inc/snpExceptions.h
+++ src/hg/inc/snpExceptions.h
@@ -1,94 +1,83 @@
 /* snpExceptions.h was originally generated by the autoSql program, which also 
  * generated snpExceptions.c and snpExceptions.sql.  This header links the database and
  * the RAM representation of objects. */
 
 #ifndef SNPEXCEPTIONS_H
 #define SNPEXCEPTIONS_H
 
 #ifndef JKSQL_H
 #include "jksql.h"
 #endif
 
 #define SNPEXCEPTIONS_NUM_COLS 5
 
 struct snpExceptions
 /* Set of queries to look for snps that appear problematic */
     {
     struct snpExceptions *next;  /* Next in singly linked list. */
     unsigned exceptionId;	/* unique ID for this exception */
     char *query;	/* SQL string to retrieve bad records */
     unsigned num;	/* Count of SNPs that fail this condition */
     char *description;	/* Text string for readability */
     char *resultPath;	/* path for results file */
     };
 
 void snpExceptionsStaticLoad(char **row, struct snpExceptions *ret);
 /* Load a row from snpExceptions table into ret.  The contents of ret will
  * be replaced at the next call to this function. */
 
 struct snpExceptions *snpExceptionsLoad(char **row);
 /* Load a snpExceptions from row fetched with select * from snpExceptions
  * from database.  Dispose of this with snpExceptionsFree(). */
 
 struct snpExceptions *snpExceptionsLoadAll(char *fileName);
 /* Load all snpExceptions from whitespace-separated file.
  * Dispose of this with snpExceptionsFreeList(). */
 
 struct snpExceptions *snpExceptionsLoadAllByChar(char *fileName, char chopper);
 /* Load all snpExceptions from chopper separated file.
  * Dispose of this with snpExceptionsFreeList(). */
 
 #define snpExceptionsLoadAllByTab(a) snpExceptionsLoadAllByChar(a, '\t');
 /* Load all snpExceptions from tab separated file.
  * Dispose of this with snpExceptionsFreeList(). */
 
 struct snpExceptions *snpExceptionsLoadByQuery(struct sqlConnection *conn, char *query);
 /* Load all snpExceptions from table that satisfy the query given.  
  * Where query is of the form 'select * from example where something=something'
  * or 'select example.* from example, anotherTable where example.something = 
  * anotherTable.something'.
  * Dispose of this with snpExceptionsFreeList(). */
 
 void snpExceptionsSaveToDb(struct sqlConnection *conn, struct snpExceptions *el, char *tableName, int updateSize);
 /* Save snpExceptions as a row to the table specified by tableName. 
  * As blob fields may be arbitrary size updateSize specifies the approx size
  * of a string that would contain the entire query. Arrays of native types are
  * converted to comma separated strings and loaded as such, User defined types are
- * inserted as NULL. Note that strings must be escaped to allow insertion into the database.
- * For example "autosql's features include" --> "autosql\'s features include" 
- * If worried about this use snpExceptionsSaveToDbEscaped() */
-
-void snpExceptionsSaveToDbEscaped(struct sqlConnection *conn, struct snpExceptions *el, char *tableName, int updateSize);
-/* Save snpExceptions as a row to the table specified by tableName. 
- * As blob fields may be arbitrary size updateSize specifies the approx size.
- * of a string that would contain the entire query. Automatically 
- * escapes all simple strings (not arrays of string) but may be slower than snpExceptionsSaveToDb().
- * For example automatically copies and converts: 
- * "autosql's features include" --> "autosql\'s features include" 
- * before inserting into database. */ 
+ * inserted as NULL. Strings are automatically escaped to allow insertion into the database. */
 
 struct snpExceptions *snpExceptionsCommaIn(char **pS, struct snpExceptions *ret);
 /* Create a snpExceptions out of a comma separated string. 
  * This will fill in ret if non-null, otherwise will
  * return a new snpExceptions */
 
 void snpExceptionsFree(struct snpExceptions **pEl);
 /* Free a single dynamically allocated snpExceptions such as created
  * with snpExceptionsLoad(). */
 
 void snpExceptionsFreeList(struct snpExceptions **pList);
 /* Free a list of dynamically allocated snpExceptions's */
 
 void snpExceptionsOutput(struct snpExceptions *el, FILE *f, char sep, char lastSep);
 /* Print out snpExceptions.  Separate fields with sep. Follow last field with lastSep. */
 
 #define snpExceptionsTabOut(el,f) snpExceptionsOutput(el,f,'\t','\n');
 /* Print out snpExceptions as a line in a tab-separated file. */
 
 #define snpExceptionsCommaOut(el,f) snpExceptionsOutput(el,f,',',',');
 /* Print out snpExceptions as a comma separated list including final comma. */
 
 /* -------------------------------- End autoSql Generated Code -------------------------------- */
 
 #endif /* SNPEXCEPTIONS_H */