080a160c7b9595d516c9c70e83689a09b60839d0
galt
  Mon Jun 3 12:16:53 2013 -0700
fix SQL Injection
diff --git src/hg/inc/taxonXref.h src/hg/inc/taxonXref.h
index 05b8ab9..92e5f1c 100644
--- src/hg/inc/taxonXref.h
+++ src/hg/inc/taxonXref.h
@@ -1,93 +1,82 @@
 /* taxonXref.h was originally generated by the autoSql program, which also 
  * generated taxonXref.c and taxonXref.sql.  This header links the database and
  * the RAM representation of objects. */
 
 #ifndef TAXONXREF_H
 #define TAXONXREF_H
 
 #ifndef JKSQL_H
 #include "jksql.h"
 #endif
 
 #define TAXONXREF_NUM_COLS 4
 
 struct taxonXref
 /* mapping from ucsc organism name to ncbi tax id/name */
     {
     struct taxonXref *next;  /* Next in singly linked list. */
     char *organism;	/* UCSC organism name */
     unsigned taxon;	/* NCBI taxon ID */
     char *name;	/* NCBI taxon name Binomial format  */
     char *toGenus;	/* NCBI tree down to Genus */
     };
 
 void taxonXrefStaticLoad(char **row, struct taxonXref *ret);
 /* Load a row from taxonXref table into ret.  The contents of ret will
  * be replaced at the next call to this function. */
 
 struct taxonXref *taxonXrefLoad(char **row);
 /* Load a taxonXref from row fetched with select * from taxonXref
  * from database.  Dispose of this with taxonXrefFree(). */
 
 struct taxonXref *taxonXrefLoadAll(char *fileName);
 /* Load all taxonXref from whitespace-separated file.
  * Dispose of this with taxonXrefFreeList(). */
 
 struct taxonXref *taxonXrefLoadAllByChar(char *fileName, char chopper);
 /* Load all taxonXref from chopper separated file.
  * Dispose of this with taxonXrefFreeList(). */
 
 #define taxonXrefLoadAllByTab(a) taxonXrefLoadAllByChar(a, '\t');
 /* Load all taxonXref from tab separated file.
  * Dispose of this with taxonXrefFreeList(). */
 
 struct taxonXref *taxonXrefLoadByQuery(struct sqlConnection *conn, char *query);
 /* Load all taxonXref from table that satisfy the query given.  
  * Where query is of the form 'select * from example where something=something'
  * or 'select example.* from example, anotherTable where example.something = 
  * anotherTable.something'.
  * Dispose of this with taxonXrefFreeList(). */
 
 void taxonXrefSaveToDb(struct sqlConnection *conn, struct taxonXref *el, char *tableName, int updateSize);
 /* Save taxonXref as a row to the table specified by tableName. 
  * As blob fields may be arbitrary size updateSize specifies the approx size
  * of a string that would contain the entire query. Arrays of native types are
  * converted to comma separated strings and loaded as such, User defined types are
- * inserted as NULL. Note that strings must be escaped to allow insertion into the database.
- * For example "autosql's features include" --> "autosql\'s features include" 
- * If worried about this use taxonXrefSaveToDbEscaped() */
-
-void taxonXrefSaveToDbEscaped(struct sqlConnection *conn, struct taxonXref *el, char *tableName, int updateSize);
-/* Save taxonXref as a row to the table specified by tableName. 
- * As blob fields may be arbitrary size updateSize specifies the approx size.
- * of a string that would contain the entire query. Automatically 
- * escapes all simple strings (not arrays of string) but may be slower than taxonXrefSaveToDb().
- * For example automatically copies and converts: 
- * "autosql's features include" --> "autosql\'s features include" 
- * before inserting into database. */ 
+ * inserted as NULL. Strings are automatically escaped to allow insertion into the database. */
 
 struct taxonXref *taxonXrefCommaIn(char **pS, struct taxonXref *ret);
 /* Create a taxonXref out of a comma separated string. 
  * This will fill in ret if non-null, otherwise will
  * return a new taxonXref */
 
 void taxonXrefFree(struct taxonXref **pEl);
 /* Free a single dynamically allocated taxonXref such as created
  * with taxonXrefLoad(). */
 
 void taxonXrefFreeList(struct taxonXref **pList);
 /* Free a list of dynamically allocated taxonXref's */
 
 void taxonXrefOutput(struct taxonXref *el, FILE *f, char sep, char lastSep);
 /* Print out taxonXref.  Separate fields with sep. Follow last field with lastSep. */
 
 #define taxonXrefTabOut(el,f) taxonXrefOutput(el,f,'\t','\n');
 /* Print out taxonXref as a line in a tab-separated file. */
 
 #define taxonXrefCommaOut(el,f) taxonXrefOutput(el,f,',',',');
 /* Print out taxonXref as a comma separated list including final comma. */
 
 /* -------------------------------- End autoSql Generated Code -------------------------------- */
 
 #endif /* TAXONXREF_H */