d0f0487213a1ad3654555e8ffd12d6c9478798aa
hiram
  Tue May 28 11:21:30 2013 -0700
adding to the userUtils build refs #9149
diff --git src/utils/makefile src/utils/makefile
index 99830c9..c0de6d9 100644
--- src/utils/makefile
+++ src/utils/makefile
@@ -29,119 +29,119 @@
 	bigWigSummary \
 	bigWigToBedGraph \
 	bigWigToWig \
 	calc \
 	catDir \
 	catUncomment \
 	chopFaLines \
 	colTransform \
 	countChars \
 	fastqToFa \
 	faCmp \
 	faCount \
 	faFilterN \
 	faFilter \
 	faFrag \
+	faNoise \
 	faOneRecord \
 	faPolyASizes \
 	faRandomize \
 	faRc \
 	faSize \
 	faSomeRecords \
 	faSplit \
 	faToFastq \
 	faToTab \
 	faToTwoBit \
 	faTrans \
 	findMotif \
 	headRest \
 	htmlCheck \
 	newProg \
 	nibFrag \
 	nibSize \
 	paraFetch \
 	paraSync \
 	pslLiftSubrangeBlat \
 	pslToPslx \
 	randomLines \
 	raSqlQuery \
 	raToTab \
 	raToLines \
 	rmFaDups \
 	rowsToCols \
 	sizeof \
+	spacedToTab \
 	splitFile \
 	splitFileByColumn \
 	stringify \
 	subChar \
 	subColumn \
 	tailLines \
 	textHistogram \
 	tickToDate \
 	timing \
+	toLower \
+	toUpper \
 	twoBitDup \
         twoBitInfo \
 	twoBitToFa \
 	wigCorrelate \
-	wigToBigWig
+	wigToBigWig \
+	wordLine
 
 # list of utilities to build of interest only at UCSC
 
 UCSC_APPS = \
 	addCols \
 	aNotB \
 	aveCols \
 	ccCp \
 	convolve \
 	detab \
 	endsInLf \
 	faAlign \
 	faFlyBaseToUcsc \
 	faGapLocs \
 	faGapSizes \
 	faNcbiToUcsc \
-	faNoise \
 	faSimplify \
 	faToNib \
 	faTrimPolyA \
 	faTrimRead \
 	fixCr \
 	gapSplit \
 	gffPeek \
 	git-reports \
 	gitTools \
 	htmlPics \
 	jkUniq \
 	lineCount \
 	nt4Frag \
 	pslToXa \
 	scaffoldFaToAgp \
 	scrambleFa \
-	spacedToTab \
 	subs \
 	tableSum \
 	textHist2 \
-	toLower \
-	toUpper \
 	udcCleanup \
 	undupFa \
 	upper \
 	venn \
 	verticalSplitSqlTable \
 	weedLines \
-	wigTestMaker \
-	wordLine
+	wigTestMaker
 
 # list of scripts to install
 
 SCRIPT_FILES = \
         agpToLift \
         bedCollapse.pl \
         iSync \
         lodToBedScore \
 	mkMafFrames.pl
 
 # List of all directories to build
 
 ALL_APPS = $(UTILS_APPLIST) $(UCSC_APPS)
 
 # all: builds all utilities here