b1b4bdec2ae76dfc7798ab4d5ea905a2572aa2a5 hiram Tue Jun 4 14:17:37 2013 -0700 updating userApps to make the fetchSource a separate step refs #9149 diff --git src/userApps/README src/userApps/README index a0cb807..20b64a1 100644 --- src/userApps/README +++ src/userApps/README @@ -25,30 +25,31 @@ ======================================================================== 1. Fetch the userApps directory from the kent source: git archive --format=zip -9 \ --remote=git://genome-source.cse.ucsc.edu/kent.git \ HEAD src/userApps > userApps.zip unzip -d userApps -j userApps.zip Creates the directory: ./userApps/ with several small files. 2. Build the utilities: cd userApps + make fetchSource make This build fetches (with git) approximately 200 Mb/7,800 files of kent source code, and constructs about 200 command binaries of approximate size near 500 Mb. The resulting binaries are in ./userApps/bin/ Note: there are no required shell environment settings as discussed in the genome browser build instructions. In fact, this build system will ignore and override any shell environment settings you may have for the genome browser build environment. 3. Install utilities The binaries are built into ./userApps/bin/