b2867dbd49dfd22f81d13d63c746a1ab64785707 galt Fri Jul 12 22:29:12 2013 -0700 adding mysqlSecurityCheck to makefile diff --git src/hg/utils/makefile src/hg/utils/makefile index 948d52c..ca4815b 100644 --- src/hg/utils/makefile +++ src/hg/utils/makefile @@ -1,91 +1,92 @@ # Build all directories in utils # test comment # $Id: makefile,v 1.21 2010/06/04 00:12:42 larrym Exp $ kentSrc = ../.. include ${kentSrc}/inc/localEnvironment.mk include ${kentSrc}/inc/common.mk # List of directories to build for userApps UTILS_APPLIST = \ bedExtendRanges \ bedToPsl \ bedWeedOverlapping \ chromGraphFromBin \ chromGraphToBin \ crTreeIndexBed \ crTreeSearchBed \ gapToLift \ gff3ToGenePred \ gff3ToPsl \ gtfToGenePred \ hubCheck \ makeTableList \ oligoMatch \ overlapSelect \ positionalTblCheck \ pslMap \ tdbQuery \ twoBitMask SCRIPT_FILES = \ dbNsfpToBed.pl \ dumpDb.pl \ mergeOverlapBed4.pl \ mergeSortedBed3Plus.pl # List of directories to build of interest only at UCSC DIRS = \ hubPublicCheck \ safePush \ toDev64 \ automation \ refreshNamedSessionCustomTracks \ refSeqGet \ wigBedToStep \ pslUniq \ makeTrackIndex \ - geoMirrorNode + geoMirrorNode \ + mysqlSecurityCheck TEST_DIRS = \ gff3ToGenePred \ gff3ToPsl \ gtfToGenePred \ overlapSelect \ pslMap \ refSeqGet APPS = $(DIRS) $(UTILS_APPLIST) all:: utils utils: $(APPS:%=%.utils) %.utils: cd $* && echo $* && $(MAKE) userApps: $(UTILS_APPLIST:%=%.userApp) %.userApp: cd $* && echo $* && $(MAKE) scripts: $(SCRIPT_FILES:%=%.scripts) %.scripts: chmod +x $* rm -f ${SCRIPTS}/$* cp -p $* ${SCRIPTS}/$* alpha: scripts all test:: ${TEST_DIRS:%=%.test} %.test: (cd $* && ${MAKE} test) clean:: $(APPS:%=%.clean) - find . -name '*.o' -exec rm {} \; %.clean: (cd $* && ${MAKE} clean) compile:: $(APPS:%=%.compile) - find . -name '*.o' -exec rm {} \; %.compile: (cd $* && ${MAKE} compile)