ec6b077e1f296c3648bdb20270c19bf376fd739a hiram Mon Aug 5 14:00:05 2013 -0700 correct error exit on a simple 'make' before fetchSource refs #9149 diff --git src/userApps/Makefile src/userApps/Makefile index 31258dd..373c1aa 100644 --- src/userApps/Makefile +++ src/userApps/Makefile @@ -1,68 +1,69 @@ # Makefile for userApps project # performs the operations of fetching selected directories from # the kent source tree using 'git' and then building the utilities # in the kent source tree. All build results will be kept locally # in this directory. export DESTDIR = ${CURDIR} export BINDIR = /bin export MACHTYPE = local export CGI_BIN = ${DESTDIR}/cgi-bin export DOCUMENTROOT = ${DESTDIR}/htdocs export SCRIPTS = ${DESTDIR}/scripts export SAMTABIXDIR = ${DESTDIR}/samtabix export USE_SAMTABIX = 1 export USE_SSL = 1 export NOSQLTEST = 1 all: utils utils: libs cd kent/src && ${MAKE} userApps cd kent/src/parasol && ${MAKE} ./kent/src/utils/userApps/mkREADME.sh ${DESTDIR}/${BINDIR} ${CURDIR}/kentUtils.Documentation.txt libs: installEnvironment cd samtabix && ${MAKE} cd kent/src && ${MAKE} libs clean: test ! -d kent/src || (cd kent/src && ${MAKE} -i -k clean) rm -f part1Src.zip part2Src.zip part3Src.zip part4Src.zip part5Src.zip rm -f userApps.zip fetchSource: ./fetchKentSource.sh @echo -n "size of fetched kent source tree: " @du -hs kent @echo -n "number of files in kent source tree: " @find ./kent -type f | wc -l # this installEnvironment will add all the shell environment variables # to the kent/src/inc/localEnvironment.mk file which is included # from the kent/src/inc/userApps.mk to allow any 'make' to function # properly when inside this extracted source tree. The 'sed' operation # removes the '-e' from the echo for systems where the echo command doesn't # recognize the '-e' argument installEnvironment: + @test -s kent/src/inc/localEnvironment.mk || echo "ERROR: source has not been fetched yet, try 'make fetchSource' first."; exit 255 @echo -e "export DESTDIR = ${DESTDIR}\n\ export BINDIR = ${BINDIR}\n\ export MACHTYPE = ${MACHTYPE}\n\ export CGI_BIN = ${CGI_BIN}\n\ export DOCUMENTROOT = ${DOCUMENTROOT}\n\ export SCRIPTS = ${SCRIPTS}\n\ export SAMTABIXDIR = ${SAMTABIXDIR}\n\ export USE_SAMTABIX = 1\n\ export USE_SSL = 1\n\ export NOSQLTEST = 1" | sed -e 's/-e //' > kent/src/inc/localEnvironment.mk update: clean userApps ${MAKE} fetchSource ${MAKE} utils userApps: git archive --format=zip -9 \ --remote=git://genome-source.cse.ucsc.edu/kent.git \ HEAD src/userApps > userApps.zip unzip -q -o -d . -j userApps.zip