b944ac8c9b973d62e412653a719061547e88e4cc steve Wed Sep 4 12:20:31 2013 -0700 Added entries for the tenrec release (redmine #9693) diff --git src/hg/htdocs/indexNews.html src/hg/htdocs/indexNews.html index d634037..318be8f 100755 --- src/hg/htdocs/indexNews.html +++ src/hg/htdocs/indexNews.html @@ -1,85 +1,114 @@ <!-- News Section ============================================- --> <TABLE WIDTH="100%" BGCOLOR="#888888" BORDER="0" CELLSPACING="0" CELLPADDING="1"> <TR><TD> <TABLE BGCOLOR="#fffee8" WIDTH="100%" BORDER="0" CELLSPACING="0" CELLPADDING="0"> <TR><TD> <TABLE BGCOLOR="#D9E4F8" BACKGROUND="images/hr.gif" WIDTH="100%" BORDER=0> <TR><TD> <!--cheap trick to get background on row to be continuous--> <TABLE CELLPADDING=0 CELLSPACING=0 WIDTH="100%"> <TR><TD ALIGN="left"> <font size="4"><a name="TOC"></a><b> News</b></font><a href="http://www.twitter.com/GenomeBrowser" target="_blank"><img src="http://twitter-badges.s3.amazonaws.com/t_small-a.png" alt="Follow GenomeBrowser on Twitter" style="vertical-align:text-bottom; margin-left: 15px;"></a></TD> <TD ALIGN="right"><A HREF="goldenPath/newsarch.html"><IMG SRC="images/news.jpg" ALT="" ALIGN="right" BORDER=0></A> </TD></TR></TABLE> </TD></TR></TABLE> <TABLE BGCOLOR="#fffee8" WIDTH="100%" CELLPADDING=0> <TR><TH HEIGHT=3></TH></TR> <TR><TD WIDTH=10></TD> <TD> <P> To receive announcements of new genome assembly releases, new software features, updates and training seminars by email, subscribe to the <A HREF="http://groups.google.com/a/soe.ucsc.edu/group/genome-announce?hl=en" TARGET=_blank>genome-announce</A> mailing list.</P> <!-- start news --> <font face="courier" size="3"><b>04 September 2013 - + New Tenrec (echTel2) Assembly Now Available in the Genome Browser</b></font> + <p> + We are pleased to announce the release of a Genome Browser for the November 2012 + assembly of tenrec, <em>Echinops telfairi</em> (Broad EchTel2.0, UCSC version + echTel2). The whole genome shotgun assembly was provided by + <a href="http://www.broadinstitute.org/" + target="_blank">The Broad Institute</a>. + There are 8,402 scaffolds with a total size of 2,947,024,286 bases. + </p> + <p> + Bulk downloads of the sequence and annotation data are available via the Genome + Browser + <a href="ftp://hgdownload.cse.ucsc.edu/goldenPath/echTel2/">FTP server</a> + or the + <a href="http://hgdownload.cse.ucsc.edu/downloads.html#tenrec">Downloads</a> + page. These data have + <a href="/goldenPath/credits.html#tenrec_credits">specific conditions for use</a>. + The tenrec (echTel2) browser annotation tracks were generated by UCSC and + collaborators worldwide. See the + <a href="/goldenPath/credits.html#tenrec_credits">Credits</a> page for a detailed + list of the organizations and individuals who contributed to this release. + </p> + + <font face="courier" size="3"><b>04 September 2013 - New Sheep (oviAri3) Assembly Now Available in the Genome Browser</b></font> <p> We are pleased to announce the release of a Genome Browser for the August 2012 assembly of sheep, <em>Ovis aries</em> (ISGC Oar_v3.1, UCSC version oviAri3). The whole genome shotgun assembly was provided by the <a href="http://www.sheephapmap.org" target="_blank">International Sheep Genomics Consortium</a>. There are 5,698 scaffolds with a total size of 2,619,054,388 bases. </p> <p> Bulk downloads of the sequence and annotation data are available via the Genome Browser <a href="ftp://hgdownload.cse.ucsc.edu/goldenPath/oviAri3/">FTP server</a> or the <a href="http://hgdownload.cse.ucsc.edu/downloads.html#sheep">Downloads</a> page. These data have <a href="/goldenPath/credits.html#sheep_credits">specific conditions for use</a>. The sheep (oviAri3) browser annotation tracks were generated by UCSC and collaborators worldwide. See the <a href="/goldenPath/credits.html#sheep_credits">Credits</a> page for a detailed list of the organizations and individuals who contributed to this release. </p> + <!-- staged for archive use + <p> + <font face="courier" size="3"><b>04 September 2013 - + New Tenrec (echTel2) Assembly Now Available in the Genome Browser</b></font> + <a href="goldenPath/newsarch.html#090413">Read more</a>. + </p> + <p> + <font face="courier" size="3"><b>04 September 2013 - + New Sheep (oviAri3) Assembly Now Available in the Genome Browser</b></font> + <a href="goldenPath/newsarch.html#090413">Read more</a>. + </p> + + --> + <!-- start archives --> <hr> <p> <p> <font face="courier" size="3"><b>22 August 2013 - Three New Human Variation Tracks Released:</b></font> We are pleased to announce the release of three tracks that describe human genetic variation. <a href="goldenPath/newsarch.html#082213">Read more</a>. </p> <p> <font face="courier" size="3"><b>22 July 2013 - Variant Annotation Integrator:</b></font> In order to assist researchers in annotating and prioritizing thousands of variant calls from sequencing projects, we have developed the Variant Annotation Integrator (VAI). <a href="goldenPath/newsarch.html#072213">Read more</a>. </p> - <!-- staged for archive use - <p> - <font face="courier" size="3"><b>04 September 2013 - - New Sheep (oviAri3) Assembly Now Available in the Genome Browser</b></font> - <a href="goldenPath/newsarch.html#090413">Read more</a>. - </p> - - --> - </TD><TD WIDTH=15> </TD></TR></TABLE> <BR></TD></TR></TABLE> </TD></TR></TABLE>