c28c1ef92c57fb16bdb8b1ad6e78879d03d39311 donnak Mon Oct 14 13:47:24 2013 -0700 Fixed some typos and formatting probs in the usage message in conjunction with updating blat spec. diff --git src/utils/faToTwoBit/faToTwoBit.c src/utils/faToTwoBit/faToTwoBit.c index e111bdc..0ac1a0b 100644 --- src/utils/faToTwoBit/faToTwoBit.c +++ src/utils/faToTwoBit/faToTwoBit.c @@ -5,34 +5,34 @@ #include "options.h" #include "dnaseq.h" #include "dnautil.h" #include "fa.h" #include "twoBit.h" void usage() /* Explain usage and exit. */ { errAbort( "faToTwoBit - Convert DNA from fasta to 2bit format\n" "usage:\n" " faToTwoBit in.fa [in2.fa in3.fa ...] out.2bit\n" "options:\n" - " -noMask - Ignore lower-case masking in fa file.\n" - " -stripVersion - Strip off version number after . for genbank accessions.\n" - " -ignoreDups - only convert first sequence if there are duplicate sequence\n" - " - names. Use 'twoBitDup' to find duplicate sequences." + " -noMask Ignore lower-case masking in fa file.\n" + " -stripVersion Strip off version number after '.' for GenBank accessions.\n" + " -ignoreDups Convert first sequence only if there are duplicate sequence\n" + " names. Use 'twoBitDup' to find duplicate sequences." ); } boolean noMask = FALSE; boolean stripVersion = FALSE; boolean ignoreDups = FALSE; static struct optionSpec options[] = { {"noMask", OPTION_BOOLEAN}, {"stripVersion", OPTION_BOOLEAN}, {"ignoreDups", OPTION_BOOLEAN}, {NULL, 0}, }; static void unknownToN(char *s, int size)