Commits for braney

v290_base to v291_preview (2013-09-30 to 2013-10-07) v291

• change a varchar field to a longblob in gwasCatalog because it wasn'tbig enough to hold the data in the flat files.
  
  • src/hg/lib/gwasCatalog.sql - lines changed 1, context: html, text, full: html, text
• update to Glenn's new API
  • src/hg/hgTracks/snakeTrack.c - lines changed 1, context: html, text, full: html, text
• add some test tracks that show XM_ and XR_ alignments
  • src/hg/makeDb/trackDb/trackDb.genbank.new.ra - lines changed 24, context: html, text, full: html, text
• turn CCDS off for braNey1
  • src/hg/makeDb/genbank/etc/genbank.conf - lines changed 1, context: html, text, full: html, text
• make a buffer larger to accomodate longer track names
  • src/hg/lib/hui.c - lines changed 1, context: html, text, full: html, text
• add chromosome color mode to snakes that uses a hash of the chrom to geta color ffrom a fixed palette. Also make pack mode a little more dense
  
  • src/hg/hgTracks/snakeTrack.c - lines changed 28, context: html, text, full: html, text
• fix a crash in snake drawing code when there are no blocks in a speciesin pack mode.
  
  • src/hg/hgTracks/snakeTrack.c - lines changed 3, context: html, text, full: html, text
• fix problem with very slow loads on eurotoad. Always use local timeinstead of sometimes gm time and sometimes local time.
  
  • src/hg/makeDb/genbank/src/lib/gbFileOps.c - lines changed 1, context: html, text, full: html, text
• get genbank utils to use etc/.hg.genome-browser-mirror.conf
  • src/hg/makeDb/genbank/etc/dbload - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/genbank/src/lib/gbCommon.pm - lines changed 1, context: html, text, full: html, text