7402d317166ea07760b9920c97a1b3d58198b7bf angie Wed Oct 9 11:04:04 2013 -0700 Updating links to Galaxy. refs #11898 diff --git src/hg/hgTables/mainPage.c src/hg/hgTables/mainPage.c index ee44b4c..018cfe2 100644 --- src/hg/hgTables/mainPage.c +++ src/hg/hgTables/mainPage.c @@ -453,31 +453,31 @@ for (ot = otList; ot != NULL; ot = ot->next) { hPrintf(" <OPTION VALUE=%s", ot->name); if (sameString(ot->name, outputType)) hPrintf(" SELECTED"); if (sameString(ot->name, outBed) || sameString(ot->name, outWigBed)) hPrintf(" id=\"outBed\""); hPrintf(">%s\n", ot->label); } hPrintf("</SELECT>\n"); hPrintf(" "); hPrintf(" Send output to "); cgiMakeCheckBoxIdAndJS("sendToGalaxy", doGalaxy(), "checkboxGalaxy", "onclick=\"document.getElementById('checkboxGreat').checked=false; return true;\""); -hPrintf("<A HREF=\"http://g2.bx.psu.edu\" target=_BLANK>Galaxy</A>\n"); +hPrintf("<A HREF=\""GALAXY_URL_BASE"\" target=_BLANK>Galaxy</A>\n"); nbSpaces(2); cgiMakeCheckBoxIdAndJS("sendToGreat", doGreat(), "checkboxGreat", "onclick=\"return onSelectGreat();\""); hPrintf(" <A HREF=\"http://great.stanford.edu\" target=_BLANK>GREAT</A>"); hPrintf("</TD></TR>\n"); } struct outputType otAllFields = { NULL, outPrimaryTable,"all fields from selected table", }; struct outputType otSelected = { NULL, outSelectedFields, "selected fields from primary and related tables", }; struct outputType otSequence = { NULL, outSequence, "sequence", }; struct outputType otPal = { NULL, outPalOptions, "CDS FASTA alignment from multiple alignment", }; struct outputType otGff = { NULL, outGff, "GTF - gene transfer format", }; @@ -927,31 +927,31 @@ /* Put up main page assuming htmlOpen()/htmlClose() * will happen in calling routine. */ { hPrintf("%s", "Use this program to retrieve the data associated with a track in text " "format, to calculate intersections between tracks, and to retrieve " "DNA sequence covered by a track. For help in using this application " "see <A HREF=\"#Help\">Using the Table Browser</A> for a description " "of the controls in this form, the " "<A HREF=\"../goldenPath/help/hgTablesHelp.html\">User's Guide</A> for " "general information and sample queries, and the OpenHelix Table Browser " "<A HREF=\"http://www.openhelix.com/cgi/tutorialInfo.cgi?id=28\" " "TARGET=_blank>tutorial</A> for a narrated presentation of the software " "features and usage. " "For more complex queries, you may want to use " - "<A HREF=\"http://main.g2.bx.psu.edu\" target=_BLANK>Galaxy</A> or " + "<A HREF=\""GALAXY_URL_BASE"\" target=_BLANK>Galaxy</A> or " "our <A HREF=\"../goldenPath/help/mysql.html\">public " "MySQL server</A>. " "To examine the biological function of your set through annotation " "enrichments, send the data to " "<A HREF=\"http://great.stanford.edu\">GREAT</A>. Refer to the " "<A HREF=\"../goldenPath/credits.html\">Credits</A> page for the list of " "contributors and usage restrictions associated with these data. " "All tables can be downloaded in their entirety from the " "<A HREF=\"http://hgdownload.cse.ucsc.edu/downloads.html\"" ">Sequence and Annotation Downloads</A> page." ); hPrintf("<script type=\"text/javascript\">\n"); hPrintf("function onSelectGreat() {\n"); hPrintf("document.getElementById('checkboxGalaxy').checked=false;\n");