Commits for galt
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v291_base to v292_preview (2013-10-21 to 2013-10-28) v292
- minor improvements suggested by angie in code review
- src/hg/htdocs/FAQ/FAQformat.html - lines changed 5, context: html, text, full: html, text
- updating for new building on dev so it will use /cgi-bin-beta/, the beta build location
- src/hg/qaPushQ/makefile - lines changed 1, context: html, text, full: html, text
- set network default read write timeout for tcp connections to browser defaults -- around 2 minutes=120 seconds. Specific applications can call the new function setReadWriteTimeouts on an open socket if they need them to be longer or shorter.
- ENCODE: adding ability to tolerate leading blank lines before a fastq record -- thereby also handles trailing blank lines
- src/hg/encode3/validateFiles/VERSION.TXT - lines changed 2, context: html, text, full: html, text
- src/hg/encode3/validateFiles/validateFiles.c - lines changed 3, context: html, text, full: html, text
- Trying to resolve several issues for valdateManifest and validateFiles including re-factoring some enriched_in checking from edwSubmit into a library.
- src/hg/encode3/encodeDataWarehouse/edwSubmit/edwSubmit.c - lines changed 4, context: html, text, full: html, text
- src/hg/encode3/encodeDataWarehouse/edwSubmit/makk - lines changed 3, context: html, text, full: html, text
- src/hg/encode3/validateManifest/VERSION.TXT - lines changed 12, context: html, text, full: html, text
- src/hg/encode3/validateManifest/validateManifest.c - lines changed 78, context: html, text, full: html, text
- src/hg/inc/encode3/encode3Valid.h - lines changed 3, context: html, text, full: html, text
- src/hg/lib/encode3/encode3Valid.c - lines changed 8, context: html, text, full: html, text
- fixes #11991 strand output can be wrong when -multiple used with bed6 stands and it hits multiple chains. The pattern by which the output strand has been wrong is complex. Only the strand info is incorrect. The other coordinates are OK.
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