70e33ad852053f320104b217db81820f0fb02152
kent
  Thu Oct 24 16:53:33 2013 -0700
Making blat top out at 75k instead of 25k reads.
diff --git src/hg/hgBlat/hgBlat.c src/hg/hgBlat/hgBlat.c
index 2d0d129..d752c46 100644
--- src/hg/hgBlat/hgBlat.c
+++ src/hg/hgBlat/hgBlat.c
@@ -512,31 +512,31 @@
     }
 if (seqList != NULL && seqList->name[0] == 0)
     {
     freeMem(seqList->name);
     seqList->name = cloneString("YourSeq");
     }
 trimUniq(seqList);
 
 /* If feeling lucky only do the first on. */
 if(feelingLucky && seqList != NULL)
     {
     seqList->next = NULL;
     }
 
 /* Figure out size allowed. */
-maxSingleSize = (isTx ? 10000 : 25000);
+maxSingleSize = (isTx ? 10000 : 75000);
 maxTotalSize = maxSingleSize * 2.5;
 #ifdef LOWELAB
 maxSeqCount = 200;
 #else
 maxSeqCount = 25;
 #endif
 
 /* Create temporary file to store sequence. */
 trashDirFile(&faTn, "hgSs", "hgSs", ".fa");
 faWriteAll(faTn.forCgi, seqList);
 
 /* Create a temporary .psl file with the alignments against genome. */
 trashDirFile(&pslTn, "hgSs", "hgSs", ".pslx");
 f = mustOpen(pslTn.forCgi, "w");
 gvo = gfOutputPsl(0, qIsProt, FALSE, f, FALSE, TRUE);