9dd1578fe014759a6642f1e30a7003caf2582f30 kate Thu Oct 31 22:23:02 2013 -0700 Remove hard-coded tablename for TFBS Motifs diff --git src/hg/inc/txCluster.h src/hg/inc/txCluster.h index b6f4c6b..91fd162 100644 --- src/hg/inc/txCluster.h +++ src/hg/inc/txCluster.h @@ -1,29 +1,24 @@ /* txCluster.h was originally generated by the autoSql program, which also * generated txCluster.c and txCluster.sql. This header links the database and * the RAM representation of objects. */ #ifndef TXCLUSTER_H #define TXCLUSTER_H #define TXCLUSTER_NUM_COLS 8 -// Turn this on to show high-confidence binding sites within clusters. -// TODO: Belongs elsewhere (reg not tx code), and -// it should be a track setting rather than hard-coded tablename -#define TXCLUSTER_MOTIFS_TABLE "wgEncodeRegTfbsClusteredMotifs" - struct txCluster /* A cluster of transcripts or coding regions */ { struct txCluster *next; /* Next in singly linked list. */ char *chrom; /* Chromosome (or contig) */ int chromStart; /* Zero based start within chromosome. */ int chromEnd; /* End coordinate, non inclusive. */ char *name; /* Cluster name */ int score; /* BED score - 0-1000. 0 if not used. */ char strand[2]; /* Strand - either plus or minus */ int txCount; /* Count of transcripts */ char **txArray; /* Array of transcripts */ }; struct txCluster *txClusterLoad(char **row);