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27 November 2013 -
100 Species Conservation Track now available on hg19
After 15.4 years of CPU run-time in 9,905,594 individual 'jobs' and 99 cluster runs for lastz
pair-wise alignment...we are excited to announce the release of a 100 species alignment on the
hg19/GRCh37 human Genome Browser.
This new Conservation track shows multiple alignments of 100 species and measurements of
evolutionary conservation using two methods (phastCons and phyloP) from the PHAST package.
- This adds 40 more species to the existing 60way on the mm10 mouse browser. For more information
- about the 100 species Conservation track, see its description page.
+ This adds 40 more species to the existing 60-way on the mm10 mouse browser. For more information
+ about the 100 species Conservation track, see its
+ description page.
We'd also like to acknowledge the hard work of the UCSC Genome Browser staff who pulled together
the information for this track: Hiram Clawson and Pauline Fujita.
24 October 2013 -
Job Opening: UCSC Genome Browser Trainer
The Center for Biomolecular Science
and Engineering (CBSE) at University of California Santa Cruz
seeks an articulate, self-motivated educator for the two-year position of UCSC Genome
Browser trainer. The trainer develops curriculum and provides in-person training on the UCSC
Genome Browser at universities, hospitals, institutes, and professional
meetings in the United States and internationally. Typical audiences include graduate
and post-graduate biologists and doctors, with Genome Browser experience ranging from novice
users to bioinformatics specialists. Presentations include formal talks, problem-solving
sessions, and two-day workshops.
This position requires a Master's degree in a biological science, depth in molecular
biology, experience in a research environment, working knowledge of the UCSC Genome Browser,
understanding of its role in research methodology, and experience teaching or training in a
scientific environment. Preferred qualifications include a PhD in a relevant field,
experience with video production, and experience with HTML or web content management
systems.
For more information and to apply for this position, see
Job #1304619 on the UCSC Staff
Employment website.
23 October 2013 -
dbSNP 138 Available for hg19:
We are pleased to announce the release of four tracks derived from NCBI
dbSNP Build 138
data, available on the human assembly (GRCh37/hg19).
Read more.
11 October 2013 -
Updated DGV Structural Variation Track:
The UCSC Genome Browser team is pleased to announce an updated DGV Structural Variation
track to reflect the official launch of the new Database of Genomic Variants.
Read more.
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