af8e4d1f9fc8cd99e241f8ccac7122b1abb48bcb
angie
Thu Nov 21 10:13:30 2013 -0800
Removed duplicate entry for refreshNamedSessionCustomTracks (see ${buildRefresh}).
diff --git src/hg/utils/makefile src/hg/utils/makefile
index b267b4c..d1d27b6 100644
--- src/hg/utils/makefile
+++ src/hg/utils/makefile
@@ -1,102 +1,101 @@
# Build all directories in utils
# test comment
# $Id: makefile,v 1.21 2010/06/04 00:12:42 larrym Exp $
kentSrc = ../..
include ${kentSrc}/inc/localEnvironment.mk
include ${kentSrc}/inc/common.mk
# to check for Mac OSX Darwin specifics:
UNAME_S := $(shell uname -s)
# can not build this on Mac OSX - has functions not supported
ifeq ($(UNAME_S),Darwin)
buildRefresh=
else
buildRefresh=refreshNamedSessionCustomTracks
endif
# List of directories to build for userApps
UTILS_APPLIST = \
bedExtendRanges \
bedToPsl \
bedWeedOverlapping \
chromGraphFromBin \
chromGraphToBin \
crTreeIndexBed \
crTreeSearchBed \
gapToLift \
gff3ToGenePred \
gff3ToPsl \
gtfToGenePred \
hubCheck \
makeTableList \
oligoMatch \
overlapSelect \
positionalTblCheck \
pslMap \
tdbQuery \
twoBitMask
SCRIPT_FILES = \
dbNsfpToBed.pl \
dumpDb.pl \
mergeOverlapBed4.pl \
mergeSortedBed3Plus.pl
# List of directories to build of interest only at UCSC
DIRS = ${buildRefresh} \
hubPublicCheck \
safePush \
toDev64 \
automation \
- refreshNamedSessionCustomTracks \
refSeqGet \
wigBedToStep \
pslUniq \
makeTrackIndex \
geoMirrorNode \
mysqlSecurityCheck
TEST_DIRS = \
gff3ToGenePred \
gff3ToPsl \
gtfToGenePred \
overlapSelect \
pslMap \
refSeqGet
APPS = $(DIRS) $(UTILS_APPLIST)
all:: utils
utils: $(APPS:%=%.utils)
%.utils:
cd $* && echo $* && $(MAKE)
userApps: $(UTILS_APPLIST:%=%.userApp)
%.userApp:
cd $* && echo $* && $(MAKE)
scripts: $(SCRIPT_FILES:%=%.scripts)
%.scripts:
chmod +x $*
rm -f ${SCRIPTS}/$*
cp -p $* ${SCRIPTS}/$*
alpha: scripts all
test:: ${TEST_DIRS:%=%.test}
%.test:
(cd $* && ${MAKE} test)
clean:: $(APPS:%=%.clean)
- find . -name '*.o' -exec rm {} \;
%.clean:
(cd $* && ${MAKE} clean)
compile:: $(APPS:%=%.compile)
- find . -name '*.o' -exec rm {} \;
%.compile:
(cd $* && ${MAKE} compile)