c3622baedca8d8c7df2c69754b943179e8d04d61
kent
  Fri Dec 27 18:42:23 2013 -0800
Moving jobResult to lib directory so it can be shared.
diff --git src/parasol/para/jobResult.c src/parasol/para/jobResult.c
deleted file mode 100644
index d5d6eac..0000000
--- src/parasol/para/jobResult.c
+++ /dev/null
@@ -1,207 +0,0 @@
-/* jobResult.c was originally generated by the autoSql program, which also 
- * generated jobResult.h and jobResult.sql.  This module links the database and
- * the RAM representation of objects. */
-
-#include "paraCommon.h"
-#include "linefile.h"
-#include "dystring.h"
-#include "sqlNum.h"
-#include "sqlList.h"
-#include "jobResult.h"
-
-void jobResultStaticLoad(char **row, struct jobResult *ret)
-/* Load a row from jobResult table into ret.  The contents of ret will
- * be replaced at the next call to this function. */
-{
-ret->status = sqlSigned(row[0]);
-ret->host = row[1];
-ret->jobId = row[2];
-ret->exe = row[3];
-ret->usrTicks = sqlSigned(row[4]);
-ret->sysTicks = sqlSigned(row[5]);
-ret->submitTime = sqlUnsigned(row[6]);
-ret->startTime = sqlUnsigned(row[7]);
-ret->endTime = sqlUnsigned(row[8]);
-ret->user = row[9];
-ret->errFile = row[10];
-}
-
-struct jobResult *jobResultLoad(char **row)
-/* Load a jobResult from row fetched with select * from jobResult
- * from database.  Dispose of this with jobResultFree(). */
-{
-struct jobResult *ret;
-
-AllocVar(ret);
-ret->status = sqlSigned(row[0]);
-ret->host = cloneString(row[1]);
-ret->jobId = cloneString(row[2]);
-ret->exe = cloneString(row[3]);
-ret->usrTicks = sqlSigned(row[4]);
-ret->sysTicks = sqlSigned(row[5]);
-ret->submitTime = sqlUnsigned(row[6]);
-ret->startTime = sqlUnsigned(row[7]);
-ret->endTime = sqlUnsigned(row[8]);
-ret->user = cloneString(row[9]);
-ret->errFile = cloneString(row[10]);
-return ret;
-}
-
-struct jobResult *jobResultLoadAll(char *fileName, off_t *resultBookMark, off_t resultsSize) 
-/* Load all jobResult from a tab-separated file, starting from bookMark, ending at resultsSize.
- * Dispose of this with jobResultFreeList(). */
-{
-struct jobResult *list = NULL, *el;
-struct lineFile *lf = lineFileOpen(fileName, FALSE);
-int lineSize, wordCount;
-char *row[11], *line;
-off_t bookMark = *resultBookMark;
-lineFileSeek(lf, bookMark, SEEK_SET);
-if (bookMark > resultsSize)
-    errAbort("bookMark (%llu) > resultsSize (%llu)", 
-      (unsigned long long) bookMark,
-      (unsigned long long) resultsSize);
-if (bookMark == resultsSize)
-    return list;
-while (lineFileNext(lf, &line, &lineSize))
-    {
-    bookMark = lineFileTell(lf);
-    if (bookMark >= resultsSize)
-	break;
-    char lastChar = line[lineSize-1];
-    if (lastChar != '\n')
-    	{
-	// warn("Skipping incomplete last line of %s", fileName);
-	break;
-	}
-    line[lineSize-1] = 0;
-    wordCount = chopLine(line, row);
-    lineFileExpectWords(lf, ArraySize(row), wordCount);
-    el = jobResultLoad(row);
-    slAddHead(&list, el);
-    }
-bookMark = lineFileTell(lf);
-lineFileClose(&lf);
-slReverse(&list);
-*resultBookMark = bookMark;
-return list;
-}
-
-#ifdef USING_SQL
-struct jobResult *jobResultLoadWhere(struct sqlConnection *conn, char *table, char *where)
-/* Load all jobResult from table that satisfy where clause. The
- * where clause may be NULL in which case whole table is loaded
- * Dispose of this with jobResultFreeList(). */
-{
-struct jobResult *list = NULL, *el;
-struct dyString *query = dyStringNew(256);
-struct sqlResult *sr;
-char **row;
-
-// should be changed to sqlDyStringPrintf for NOSQLINJ
-// but that would perhaps require moving this code to someplace under hg/ ?
-dyStringPrintf(query, "select * from %s", table);
-if (where != NULL)
-    dyStringPrintf(query, " where %s", where);
-sr = sqlGetResult(conn, query->string);
-while ((row = sqlNextRow(sr)) != NULL)
-    {
-    el = jobResultLoad(row);
-    slAddHead(&list, el);
-    }
-slReverse(&list);
-sqlFreeResult(&sr);
-dyStringFree(&query);
-return list;
-}
-#endif /* USEING_SQL */
-
-struct jobResult *jobResultCommaIn(char **pS, struct jobResult *ret)
-/* Create a jobResult out of a comma separated string. 
- * This will fill in ret if non-null, otherwise will
- * return a new jobResult */
-{
-char *s = *pS;
-
-if (ret == NULL)
-    AllocVar(ret);
-ret->status = sqlSignedComma(&s);
-ret->host = sqlStringComma(&s);
-ret->jobId = sqlStringComma(&s);
-ret->exe = sqlStringComma(&s);
-ret->usrTicks = sqlSignedComma(&s);
-ret->sysTicks = sqlSignedComma(&s);
-ret->submitTime = sqlUnsignedComma(&s);
-ret->startTime = sqlUnsignedComma(&s);
-ret->endTime = sqlUnsignedComma(&s);
-ret->user = sqlStringComma(&s);
-ret->errFile = sqlStringComma(&s);
-*pS = s;
-return ret;
-}
-
-void jobResultFree(struct jobResult **pEl)
-/* Free a single dynamically allocated jobResult such as created
- * with jobResultLoad(). */
-{
-struct jobResult *el;
-
-if ((el = *pEl) == NULL) return;
-freeMem(el->host);
-freeMem(el->jobId);
-freeMem(el->exe);
-freeMem(el->user);
-freeMem(el->errFile);
-freez(pEl);
-}
-
-void jobResultFreeList(struct jobResult **pList)
-/* Free a list of dynamically allocated jobResult's */
-{
-struct jobResult *el, *next;
-
-for (el = *pList; el != NULL; el = next)
-    {
-    next = el->next;
-    jobResultFree(&el);
-    }
-*pList = NULL;
-}
-
-void jobResultOutput(struct jobResult *el, FILE *f, char sep, char lastSep) 
-/* Print out jobResult.  Separate fields with sep. Follow last field with lastSep. */
-{
-fprintf(f, "%d", el->status);
-fputc(sep,f);
-if (sep == ',') fputc('"',f);
-fprintf(f, "%s", el->host);
-if (sep == ',') fputc('"',f);
-fputc(sep,f);
-if (sep == ',') fputc('"',f);
-fprintf(f, "%s", el->jobId);
-if (sep == ',') fputc('"',f);
-fputc(sep,f);
-if (sep == ',') fputc('"',f);
-fprintf(f, "%s", el->exe);
-if (sep == ',') fputc('"',f);
-fputc(sep,f);
-fprintf(f, "%d", el->usrTicks);
-fputc(sep,f);
-fprintf(f, "%d", el->sysTicks);
-fputc(sep,f);
-fprintf(f, "%u", el->submitTime);
-fputc(sep,f);
-fprintf(f, "%u", el->startTime);
-fputc(sep,f);
-fprintf(f, "%u", el->endTime);
-fputc(sep,f);
-if (sep == ',') fputc('"',f);
-fprintf(f, "%s", el->user);
-if (sep == ',') fputc('"',f);
-fputc(sep,f);
-if (sep == ',') fputc('"',f);
-fprintf(f, "%s", el->errFile);
-if (sep == ',') fputc('"',f);
-fputc(lastSep,f);
-}
-