f7b6a2cccde8463b5648f764203634e42dbc76be max Thu Jan 16 01:00:05 2014 -0800 fixing stray div, refs #12079 diff --git src/hg/lib/pubsBingBlat.sql src/hg/lib/pubsBingBlat.sql index f68ecc3..e6f3675 100644 --- src/hg/lib/pubsBingBlat.sql +++ src/hg/lib/pubsBingBlat.sql @@ -3,19 +3,32 @@ `chrom` varchar(255) NOT NULL, # chromosome `chromStart` int(10) unsigned NOT NULL, # start position on chromosome `chromEnd` int(10) unsigned NOT NULL, # end position on chromosome `name` varchar(255) NOT NULL, # internal articleId, article that matches here `score` int(10) unsigned NOT NULL, # score of feature `strand` char(1) NOT NULL, # strand of feature `thickStart` int(10) unsigned NOT NULL, # start of exons `thickEnd` int(10) unsigned NOT NULL, #end of exons `reserved` int(10) unsigned NOT NULL, # no clue `blockCount` int(10) unsigned NOT NULL, # number of blocks `blockSizes` longblob NOT NULL, # size of blocks `chromStarts` longblob NOT NULL, # A comma-separated list of block starts `tSeqTypes` varchar(255) NOT NULL, # comma-seq list of matching sequence db (g=genome, p=protein, c=cDNA) `seqIds` blob NOT NULL, # comma-separated list of matching seqIds `seqRanges` blob NOT NULL, # ranges start-end on sequence that matched, one for each seqId + `publisher` varchar(255) NOT NULL, # publisher of article, for hgTracks feature filter + `pmid` varchar(255) NOT NULL, # PMID of article, for annoGrator output, avoids table join + `doi` varchar(255) NOT NULL, # doi of article, for annoGrator output, avoids table join + `issn` varchar(255) NOT NULL, # issn of journal + `journal` varchar(255) NOT NULL, # name of journal + `title` varchar(255) NOT NULL, # title of article, for genome browser mouseover + `firstAuthor` varchar(255) NOT NULL, # first author family name of article, for genome browser + `year` varchar(255) NOT NULL, # issn of journal for article, for genome browser + `impact` varchar(255) NOT NULL, # impact factor of journal, for genome browser coloring, derived from official impact factors: max impact is 25, value is scaled to 0-255 + `classes` varchar(255) NOT NULL, # classes assigned to journal article, for genome browser coloring + `locus` varchar(255) NOT NULL, # closest gene symbols, one or two, comma-separated KEY `name` (`name`(16)), + KEY `pmid` (`pmid`(16)), + KEY `doi` (`doi`(16)), KEY `chrom` (`chrom`(6)), KEY `chromStartAndName` (`chrom`(6), chromStart, name) );