Commits for braney

v297_preview2 to v297_base (2014-03-10 to 2014-03-17) v297

• fix an issue with a function definition change that was breaking BioPerl
  • src/inc/bigWig.h - lines changed 11, context: html, text, full: html, text
  • src/lib/bwgCreate.c - lines changed 16, context: html, text, full: html, text
  • src/utils/wigToBigWig/wigToBigWig.c - lines changed 1, context: html, text, full: html, text
• add updated knownGene.html page for hg38. This will probably need acouple more tweaks to get the numbers right for non-coding, etc
  
  • src/hg/makeDb/trackDb/human/hg38/knownGene.html - lines changed 163, context: html, text, full: html, text
• mm10 ucsc genes is ready for QA, reloading uniProt table to fix bug inspToDb. Load a coupple more tables in the proteome database
  
  • src/hg/lib/spOldNew.sql - lines changed 1, context: html, text, full: html, text
  • src/hg/lib/spVariant.sql - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/doc/proteins/140122.txt - lines changed 37, context: html, text, full: html, text
  • src/hg/makeDb/doc/ucscGenes/mm10.ucscGenes14.csh - lines changed 258, context: html, text, full: html, text
  • src/hg/makeDb/doc/uniProt/sp140122.txt - lines changed 35, context: html, text, full: html, text
  • src/hg/protein/spToDb/spToDb.c - lines changed 1, context: html, text, full: html, text
• disable kg5ToKg6 checking on mm10 with new gene set
  • src/hg/makeDb/schema/all.joiner - lines changed 1, context: html, text, full: html, text
• add knownGeneOld6 to trackDb for Old UCSC Genes track.
  • src/hg/makeDb/trackDb/mouse/mm10/trackDb.ra - lines changed 20, context: html, text, full: html, text
• customFactory for bedDetails still needs to pass in the SQL file.
  • src/hg/lib/customFactory.c - lines changed 2, context: html, text, full: html, text