58d111bf42c1080890de5f83affe37ca04ce6147 Merge parents b153dea 9e9782d donnak Thu Feb 27 15:13:47 2014 -0800 Fixed merge conflict after making a few edits to training announcement at top of page. diff --cc src/hg/htdocs/training.html index 18e649d,3644985..297633b --- src/hg/htdocs/training.html +++ src/hg/htdocs/training.html @@@ -1,109 -1,117 +1,109 @@@ <!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 3.2//EN"> <HTML> <HEAD> <META HTTP-EQUIV="Content-Type" CONTENT="text/html;CHARSET=iso-8859-1"> <META http-equiv="Content-Script-Type" content="text/javascript"> <META name="description" content="UCSC Genome Browser FAQ"> <META name="keywords" content="genome, genome browser, genome assembly, UCSC, bioinformatics, sequence, gene prediction, SNP, EST, mRNA"> <TITLE>UCSC Genome Bioinformatics: Training</TITLE> <LINK REL="STYLESHEET" HREF="style/HGStyle.css"> </HEAD> <BODY BGCOLOR="FFF9D2" LINK="0000CC" VLINK="#330066" ALINK="#330066"> <A NAME="TOP"></A> <TABLE BORDER=0 CELLPADDING=0 CELLSPACING=0 WIDTH="100%"><TR><TH COLSPAN=2 ALIGN="left"><IMG SRC="../images/title.jpg" ALT="UCSC Genome Bioinformatics"></TH></TR> <TR><TD COLSPAN=2 HEIGHT=40><!--#include virtual="/inc/FAQ.topbar.html"--></TD></TR> <!--Content Tables-------------------------------------------------------> <TR><TD COLSPAN=2 CELLPADDING=10> <!--outer table is for border purposes--> <TABLE WIDTH="100%" BGCOLOR="#888888" BORDER="0" CELLSPACING="0" CELLPADDING="1"><TR><TD> <TABLE BGCOLOR="fffee8" WIDTH="100%" BORDER="0" CELLSPACING="0" CELLPADDING="0"><TR><TD> <TABLE BGCOLOR="D9E4F8" BACKGROUND="../images/hr.gif" WIDTH=100%> <TR><TD> <FONT SIZE="4"><b> Getting Help with the UCSC Genome Browser</b></FONT> </TD></TR></TABLE> <TABLE BGCOLOR="fffee8" WIDTH="100%" CELLPADDING=0><TR><TH HEIGHT=10></TH></TR> <TR><TD WIDTH=10> </TD><TD> <TABLE BGCOLOR="fffee8" WIDTH="100%" CELLPADDING=0><TR><TH HEIGHT=10></TH></TR> <TR><TD WIDTH=5> </TD><TD> <div class="warn-note" style="border: 2px solid #9e5900; padding: 5px 20px; background-color: #e8ebf7;"> - <p><span style="font-weight: bold; color: #c70000;"> <b>New! On-site workshops available:</b> </span><br> + <p><span style="font-weight: bold; color: #c70000;"> <b>New onsite workshops available!</b> </span><br> <p> - Explore the full power of the UCSC Genome Browser! Thanks to the NHGRI, - we are now offering trainings in the Genome Browser at your institution. - We will visit your location and conduct a hands-on tutorial - tailored to your audience's level of expertise. - </p> - <p> - To participate, you would need to provide a round-trip plane ticket from - California (unless we can combine destinations), lodging, and - a modest flat fee to cover other costs. NHGRI is paying the salary of our - expert trainer. + Explore the full power of the UCSC Genome Browser! Thanks to the funding support + of NHGRI, we can now offer hands-on Genome Browser training onsite at your + institution, tailored to your audience's level of expertise. Through this + program, the services of our expert trainer are provided for free, and + participating institutions cover only the transportation from UCSC, lodging, - and a modest fee to cover other costs. ++ and a flat fee to cover other costs. </p> <p> For more information or to submit a request for a workshop, please visit - this survey link: - </p> - <p> - <a href="http://bit.ly/ucscTraining" target="_blank">bit.ly/ucscTraining</a> + <a href="http://bit.ly/ucscTraining" target="_blank">our survey</a>. </p> </div> - <P> - </P> + <br><br> <B>Online Training and Tutorials:</B> <UL> <LI><A HREF="http://www.openhelix.com/ucsc" TARGET=_blank>Open Helix tutorial and training materials</A> <li><a href="http://www.nature.com/scitable/ebooks/guide-to-the-ucsc-genome-browser-16569863" target="_blank">Guide to the UCSC Genome Browser</a> <li><a href="goldenPath/help/ucscGeneFishing.pdf" target="_blank">Fishing for genes in the UCSC Browser (pdf)</a> <li><a href="http://bib.oxfordjournals.org/content/14/2/144.full" target = "_blank">The UCSC genome browser and associated tools</a> <li><a href="http://www.ncbi.nlm.nih.gov/pubmed/18514479" target = "_blank">UCSC genome browser tutorial</a> <LI><A HREF="training/ashg2009" >Step-by-step tutorial presented at ASHG 2009 annual meeting</A> - basic browser navigation and functionality in the context of interpreting clinical genetics reports. <LI><A HREF="http://genomewiki.ucsc.edu/index.php/ABRF2010_Tutorial" >Step-by-step tutorial presented at ABRF 2010 annual meeting</A> - how to convert files and display high-throughput sequencing results. <LI><A HREF="http://www.lifescied.org/cgi/content/full/9/2/98" TARGET=_blank>Teaching bioinformatics and neuroinformatics by using free web-based tools</A> - student-level tutorial that demonstrates the combined use of several major bioinformatic tools (including the UCSC Genome Browser) in answering a series of related research questions </UL> <B>User's Guides for Tools in the Genome Browser:</B> <UL> <LI><A HREF="../goldenPath/help/hgTracksHelp.html">Genome Browser User's Guide</A> <LI><A HREF="../goldenPath/help/hgTablesHelp.html">Table Browser User's Guide</A> <LI><A HREF="../goldenPath/help/hgTracksHelp.html#CustomTracks">Custom Tracks User's Guide</A> <li><a href="../goldenPath/help/hgTrackHubHelp.html">Track Hubs User's Guide</a> <LI><A HREF="../goldenPath/help/hgGenomeHelp.html">Genome Graphs User's Guide</A> <LI><A HREF="../goldenPath/help/hgSessionHelp.html">Sessions User's Guide</A> <LI><A HREF="../goldenPath/help/hgNearHelp.html">Gene Sorter User's Guide</A> </UL> <B>Contacting Us and Mailing Lists:</B> <UL> <LI><A HREF="../contacts.html">Genome Browser contact information</A> <LI><A HREF="http://groups.google.com/a/soe.ucsc.edu/group/genome?hl=en">Genome Browser mailing list<A> (interactive discussion forum) </UL> <B>Quick Links:</B> <UL> <LI><A HREF="../index.html">Genome Browser home page</A> <LI><A HREF="../goldenPath/stats.html">Summary statistics</A> (human genome only) <LI><A HREF="../goldenPath/releaseLog.html">Log of released data</A> (including annotation tracks and complete assemblies) <LI><A HREF="../goldenPath/credits.html">Software and data credits</A> </UL> <B>Mirror Sites and Source Code:</B> <UL> <LI><A HREF="../mirror.html">Genome Browser mirror sites</A> <LI><A HREF="../FAQ/FAQlicense.html#license3">Obtaining the Genome Browser source code</A> </UL> <B>Associated Publications and Documents:</B> <UL> <LI><A HREF="../goldenPath/pubs.html">UCSC Genome Bioinformatics Group publications</A> <LI><A HREF="../goldenPath/newsarch.html">News archives</A> </UL> </TD></TR></TABLE> </TD><TD WIDTH=15></TD></TR></TABLE> <br></TD></TR></TABLE> </TD></TR></TABLE> </TD></TR></TABLE> </BODY></HTML>