File Changes for kate

v298_preview2 to v298_base (2014-03-31 to 2014-04-07) v298

• src/hg/encode3/eap/eapAddStep/eapAddStep.c
  • lines changed 7, context: html, text, full: html, text
    Add SPP single-end peak-calling (first cut, prior to info from Anshul)
  • lines changed 2, context: html, text, full: html, text
    Adding initial cut of SPP ChIP-seq peak calling from bams (exploratory work ahead of spec from DAC)
  • lines changed 65, context: html, text, full: html, text
    Merge
• src/hg/encode3/eap/eapRunAddJson/eapRunAddJson.c
  • lines changed 366, context: html, text, full: html, text
    Move eapRunAddJson to oneShot dir
• src/hg/encode3/eap/eapRunAddJson/makefile
  • lines changed 4, context: html, text, full: html, text
    Move eapRunAddJson to oneShot dir
• src/hg/encode3/eap/eapSchedule/eapSchedule.c
  • lines changed 77, context: html, text, full: html, text
    Adding initial cut of SPP ChIP-seq peak calling from bams (exploratory work ahead of spec from DAC)
  • lines changed 4, context: html, text, full: html, text
    Merge
  • lines changed 4, context: html, text, full: html, text
    Tweaks for ChIP scheduling
• src/hg/encode3/eap/lib/resetDb
  • lines changed 2, context: html, text, full: html, text
    Adding initial cut of SPP ChIP-seq peak calling from bams (exploratory work ahead of spec from DAC)
  • lines changed 11, context: html, text, full: html, text
    Merge
  • lines changed 2, context: html, text, full: html, text
    Rscript is 3rdparty
• src/hg/encode3/eap/makefile
  • lines changed 1, context: html, text, full: html, text
    Remove obsolete tool
• src/hg/encode3/eap/oneShot/eapRunAddJson/eapRunAddJson.c
  • lines changed 366, context: html, text, full: html, text
    Move eapRunAddJson to oneShot dir
• src/hg/encode3/eap/oneShot/eapRunAddJson/makefile
  • lines changed 4, context: html, text, full: html, text
    Move eapRunAddJson to oneShot dir