Commits for tdreszer

v299_preview2 to v299_base (2014-04-21 to 2014-04-28) v299

• Qian at UWash created a new URL for us that will resolve rsID or position if rsID is invalid. #9329.
  • src/hg/makeDb/trackDb/human/hg19/trackDb.ra - lines changed 3, context: html, text, full: html, text
• The doTrackMap look failed to calculate Y appropriately. This should be fixed. Redmine #13087
  • src/hg/hgTracks/hgTracks.c - lines changed 2, context: html, text, full: html, text
• Added a trap for when map items are written outside the track they are supposed to be for. The trap is only on for genome-test and sandboxes. I found one bug with it: gold in dense had wild map item ending coordinates. Fixed. Redmine #13087
  • src/hg/hgTracks/goldTrack.c - lines changed 4, context: html, text, full: html, text
  • src/hg/hgTracks/imageV2.c - lines changed 61, context: html, text, full: html, text
  • src/hg/hgTracks/imageV2.h - lines changed 8, context: html, text, full: html, text
• Oops. Accidentally referenced my provate warnWithBacktrace. Still #13087
  • src/hg/hgTracks/imageV2.c - lines changed 1, context: html, text, full: html, text
• Kate's earlier check-in contained some of my not-ready-for-prime-time tesing. I have removed most of that and replaced it with the actual installs and index generations.
  • src/hg/makeDb/doc/encode3/tools.txt - lines changed 645, context: html, text, full: html, text