Commits for braney

v298_base to v299_preview (2014-04-07 to 2014-04-14) v299

• fix problem with tRNA gene symbols not having a null terminator. #12832
  • src/hg/txGene/txGeneXref/txGeneXref.c - lines changed 2, context: html, text, full: html, text
• oops... one other place needs null termination for tRNA genes intxGeneXref.c
  
  • src/hg/txGene/txGeneXref/txGeneXref.c - lines changed 1, context: html, text, full: html, text
• make snakes more compact
  • src/hg/hgTracks/snakeTrack.c - lines changed 185, context: html, text, full: html, text
• fix hubPublicCheck to not put spurious 1_ prefix on assembly hub nameswhen adding a new url, also check dbList to make sure it's right when
  checking hubs
  
  • src/hg/utils/hubPublicCheck/hubPublicCheck.c - lines changed 23, context: html, text, full: html, text
• make sure that the descriptions in kgXref correspond to what's in theGenbank record for the id we choose as the primary id. #12832
  
  • src/hg/txGene/txGeneXref/txGeneXref.c - lines changed 99, context: html, text, full: html, text
• first cut at writing out search terms from public hubs #11633
  • src/hg/inc/hubConnect.h - lines changed 2, context: html, text, full: html, text
  • src/hg/inc/trackHub.h - lines changed 7, context: html, text, full: html, text
  • src/hg/lib/hubConnect.c - lines changed 34, context: html, text, full: html, text
  • src/hg/lib/trackHub.c - lines changed 72, context: html, text, full: html, text
  • src/hg/utils/hubCheck/hubCheck.c - lines changed 12, context: html, text, full: html, text