Commits for kate

v299_preview to v299_preview2 (2014-04-14 to 2014-04-21) v299

• Begin adding styling (Stanford CSS) to edw web CGI's
  • src/hg/encode3/encodeDataWarehouse/edwWebSubmit/edwWebSubmit.c - lines changed 20, context: html, text, full: html, text
  • src/hg/encode3/encodeDataWarehouse/lib/edwLib.c - lines changed 13, context: html, text, full: html, text
• Merge branch 'master' into edwUi
• Changes to EDW web programs to polish presentation and add nav bar
  • src/hg/encode3/encodeDataWarehouse/edwWebBrowse/edwWebBrowse.c - lines changed 21, context: html, text, full: html, text
• Changes to EDW web programs to polish presentation and add nav bar
  • src/hg/encode3/encodeDataWarehouse/lib/edwLib.c - lines changed 3, context: html, text, full: html, text
• Changes to EDW web programs to polish presentation and add nav bar
  • src/hg/encode3/encodeDataWarehouse/edwWebSubmit/edwWebSubmit.c - lines changed 13, context: html, text, full: html, text
• Merge branch 'master' into edwUi
• Adding Stanford styling and navbar to EDW web cgis. Stanford RM #1372
  • src/hg/encode3/encodeDataWarehouse/edwWebBrowse/edwWebBrowse.c - lines changed 1, context: html, text, full: html, text
  • src/hg/encode3/encodeDataWarehouse/edwWebCreateUser/edwWebCreateUser.c - lines changed 4, context: html, text, full: html, text
  • src/hg/encode3/encodeDataWarehouse/edwWebDeprecate/edwWebDeprecate.c - lines changed 1, context: html, text, full: html, text
  • src/hg/encode3/encodeDataWarehouse/edwWebSubmit/edwWebSubmit.c - lines changed 1, context: html, text, full: html, text
  • src/hg/encode3/encodeDataWarehouse/lib/edwLib.c - lines changed 5, context: html, text, full: html, text
• Removing extraneous columns from fileUi for ENCODE Seg track. QA Q5. refs #12259
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeAwgSegmentation.ra - lines changed 1, context: html, text, full: html, text
• Merge branch 'master' into edwUi
  Conflicts:
  src/hg/encode3/encodeDataWarehouse/edwWebCreateUser/edwWebCreateUser.c
  
  • src/hg/encode3/encodeDataWarehouse/edwWebCreateUser/edwWebCreateUser.c - lines changed 5, context: html, text, full: html, text
  • src/hg/encode3/encodeDataWarehouse/edwWebDeprecate/edwWebDeprecate.c - lines changed 7, context: html, text, full: html, text
• Commit style sheets
  • src/hg/encode3/encodeDataWarehouse/lib/edwLib.c - lines changed 6, context: html, text, full: html, text
  • src/hg/htdocs/style/encode3.css - lines changed 8191, context: html, text, full: html, text
  • src/hg/htdocs/style/encode3Ucsc.css - lines changed 31, context: html, text, full: html, text
• Add navigation bar for ENCODE3 EDW web cgis
  • src/hg/htdocs/inc/edwNavBar.html - lines changed 21, context: html, text, full: html, text
• Add ENCODE3 CSS files for EDW web tools
  • src/hg/htdocs/style/makefile - lines changed 2, context: html, text, full: html, text
• Remove superluous signout button
  • src/hg/encode3/encodeDataWarehouse/edwWebCreateUser/edwWebCreateUser.c - lines changed 1, context: html, text, full: html, text
• Navigation bar dynamics for EDW
  • src/hg/js/edwPersona.js - lines changed 7, context: html, text, full: html, text
• Merge branch 'edwUi'
• Add Navigation bar for ENCODE3 EDW web tools
  • src/hg/inc/edwNavBar.html - lines changed 21, context: html, text, full: html, text
• Fix perms
  • src/hg/htdocs/style/encode3.css - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change shows no diff)
  • src/hg/htdocs/style/encode3Ucsc.css - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change shows no diff)
• Remove menu update as it is now handled elsewhere
  • src/hg/encode3/encodeDataWarehouse/edwWebSubmit/edwWebSubmit.c - lines changed 3, context: html, text, full: html, text
• Add autorefresh of submission monitoring display
  • src/hg/encode3/encodeDataWarehouse/edwWebBrowse/edwWebBrowse.c - lines changed 15, context: html, text, full: html, text
• Add autorefresh of submission monitoring display
  • src/hg/encode3/encodeDataWarehouse/edwWebSubmit/edwWebSubmit.c - lines changed 28, context: html, text, full: html, text
• Formaatting
  • src/hg/encode3/encodeDataWarehouse/lib/edwLib.c - lines changed 1, context: html, text, full: html, text
• Using jQuery for more concise code
  • src/hg/js/edwPersona.js - lines changed 10, context: html, text, full: html, text
• Make autorefresh work propertly with stop/restart of EDW submission
  • src/hg/encode3/encodeDataWarehouse/edwWebSubmit/edwWebSubmit.c - lines changed 13, context: html, text, full: html, text
• Code cleanup for EDW web UI improvements. Moved javascript tweaks for navigation bar and autorefresh to lib for sharing (and hiding)
  • src/hg/encode3/encodeDataWarehouse/edwWebBrowse/edwWebBrowse.c - lines changed 3, context: html, text, full: html, text
  • src/hg/encode3/encodeDataWarehouse/edwWebSubmit/edwWebSubmit.c - lines changed 4, context: html, text, full: html, text
  • src/hg/encode3/encodeDataWarehouse/inc/edwLib.h - lines changed 28, context: html, text, full: html, text
  • src/hg/encode3/encodeDataWarehouse/lib/edwLib.c - lines changed 65, context: html, text, full: html, text
• Trim defaults
  • src/hg/makeDb/trackDb/human/hg19/wgEncodeAwgSegmentation.ra - lines changed 3, context: html, text, full: html, text