e70152e44cc66cc599ff6b699eb8adc07f3e656a
kent
  Sat May 24 21:09:34 2014 -0700
Adding Copyright NNNN Regents of the University of California to all files I believe with reasonable certainty were developed under UCSC employ or as part of Genome Browser copyright assignment.
diff --git src/lib/chainConnect.c src/lib/chainConnect.c
index 3e513dc..6d4c0d9 100644
--- src/lib/chainConnect.c
+++ src/lib/chainConnect.c
@@ -1,18 +1,21 @@
 /* chainConnect - Stuff to cope with connect costs and overlaps when 
  * making chains. This works closely with the chainBlock module. */
 
+/* Copyright (C) 2011 The Regents of the University of California 
+ * See README in this or parent directory for licensing information. */
+
 #include "common.h"
 #include "chain.h"
 #include "axt.h"
 #include "gapCalc.h"
 #include "chainConnect.h"
 
 
 double chainScoreBlock(char *q, char *t, int size, int matrix[256][256])
 /* Score block through matrix. */
 {
 double score = 0;
 int i;
 for (i=0; i<size; ++i)
     score += matrix[(int)q[i]][(int)t[i]];
 return score;