e70152e44cc66cc599ff6b699eb8adc07f3e656a
kent
  Sat May 24 21:09:34 2014 -0700
Adding Copyright NNNN Regents of the University of California to all files I believe with reasonable certainty were developed under UCSC employ or as part of Genome Browser copyright assignment.
diff --git src/hg/inc/estOrientInfo.h src/hg/inc/estOrientInfo.h
index 1e661f7..5f95cda 100644
--- src/hg/inc/estOrientInfo.h
+++ src/hg/inc/estOrientInfo.h
@@ -1,76 +1,79 @@
 /* estOrientInfo.h was originally generated by the autoSql program, which also 
  * generated estOrientInfo.c and estOrientInfo.sql.  This header links the database and
  * the RAM representation of objects. */
 
+/* Copyright (C) 2005 The Regents of the University of California 
+ * See README in this or parent directory for licensing information. */
+
 #ifndef ESTORIENTINFO_H
 #define ESTORIENTINFO_H
 
 struct lm;
 struct sqlConnection;
 
 #define EST_ORIENT_INFO_NUM_COLS 9
 
 struct estOrientInfo
 /* Extra information on ESTs - calculated by polyInfo program */
     {
     struct estOrientInfo *next;  /* Next in singly linked list. */
     char *chrom;	/* Human chromosome or FPC contig */
     unsigned chromStart;	/* Start position in chromosome */
     unsigned chromEnd;	/* End position in chromosome */
     char *name;	/* Accession of EST */
     short intronOrientation;	/* Orientation of introns with respect to EST */
     short sizePolyA;	/* Number of trailing A's */
     short revSizePolyA;	/* Number of trailing A's on reverse strand */
     short signalPos;	/* Position of start of polyA signal relative to end of EST or 0 if no signal */
     short revSignalPos;	/* PolyA signal position on reverse strand if any */
     };
 
 void estOrientInfoStaticLoad(char **row, struct estOrientInfo *ret);
 /* Load a row from estOrientInfo table into ret.  The contents of ret will
  * be replaced at the next call to this function. */
 
 struct estOrientInfo *estOrientInfoLoad(char **row);
 /* Load a estOrientInfo from row fetched with select * from estOrientInfo
  * from database.  Dispose of this with estOrientInfoFree(). */
 
 struct estOrientInfo *estOrientInfoLoadAll(char *fileName);
 /* Load all estOrientInfo from a tab-separated file.
  * Dispose of this with estOrientInfoFreeList(). */
 
 struct estOrientInfo *estOrientInfoLoadWhere(struct sqlConnection *conn, char *table, char *where);
 /* Load all estOrientInfo from table that satisfy where clause. The
  * where clause may be NULL in which case whole table is loaded
  * Dispose of this with estOrientInfoFreeList(). */
 
 struct estOrientInfo *estOrientInfoCommaIn(char **pS, struct estOrientInfo *ret);
 /* Create a estOrientInfo out of a comma separated string. 
  * This will fill in ret if non-null, otherwise will
  * return a new estOrientInfo */
 
 void estOrientInfoFree(struct estOrientInfo **pEl);
 /* Free a single dynamically allocated estOrientInfo such as created
  * with estOrientInfoLoad(). */
 
 void estOrientInfoFreeList(struct estOrientInfo **pList);
 /* Free a list of dynamically allocated estOrientInfo's */
 
 void estOrientInfoOutput(struct estOrientInfo *el, FILE *f, char sep, char lastSep);
 /* Print out estOrientInfo.  Separate fields with sep. Follow last field with lastSep. */
 
 #define estOrientInfoTabOut(el,f) estOrientInfoOutput(el,f,'\t','\n');
 /* Print out estOrientInfo as a line in a tab-separated file. */
 
 #define estOrientInfoCommaOut(el,f) estOrientInfoOutput(el,f,',',',');
 /* Print out estOrientInfo as a comma separated list including final comma. */
 
 /* ----- end autoSql generated part --------------- */
 
 struct estOrientInfo *estOrientInfoLoadLm(char **row, struct lm *lm);
 /* Load a estOrientInfo row into local memory struct. */
 
 char *estOrientInfoGetCreateSql(char *table, int chromIdxLen);
 /* Get SQL to create an estOrientInfo table. chromIdxLen is the number of
  * chars at that start of chrom to use for the index. */
 
 #endif /* ESTORIENTINFO_H */