e70152e44cc66cc599ff6b699eb8adc07f3e656a
kent
  Sat May 24 21:09:34 2014 -0700
Adding Copyright NNNN Regents of the University of California to all files I believe with reasonable certainty were developed under UCSC employ or as part of Genome Browser copyright assignment.
diff --git src/hg/inc/hapmapAlleleFreq.h src/hg/inc/hapmapAlleleFreq.h
index 8f20b17..a7a3724 100644
--- src/hg/inc/hapmapAlleleFreq.h
+++ src/hg/inc/hapmapAlleleFreq.h
@@ -1,74 +1,77 @@
 /* hapmapAlleleFreq.h was originally generated by the autoSql program, which also 
  * generated hapmapAlleleFreq.c and hapmapAlleleFreq.sql.  This header links the database and
  * the RAM representation of objects. */
 
+/* Copyright (C) 2006 The Regents of the University of California 
+ * See README in this or parent directory for licensing information. */
+
 #ifndef HAPMAPALLELEFREQ_H
 #define HAPMAPALLELEFREQ_H
 
 #define HAPMAPALLELEFREQ_NUM_COLS 14
 
 struct hapmapAlleleFreq
 /* HapMap SNPs */
     {
     struct hapmapAlleleFreq *next;  /* Next in singly linked list. */
     char *chrom;	/* Reference sequence chromosome or scaffold */
     unsigned chromStart;	/* Start position */
     unsigned chromEnd;	/* End position */
     char *name;	/* rsId or id */
     unsigned score;	/* Minor allele frequency from 500 to 1000 */
     char strand[2];	/* Strand */
     char *center;	/* Sequencing center */
     char refAllele[2];	/* Reference allele */
     char otherAllele[2];	/* Variant allele */
     float refAlleleFreq;	/* Reference allele frequency (between 0.0 and 1.0) */
     float otherAlleleFreq;	/* Variant allele frequency (between 0.0 and 1.0) */
     float minorAlleleFreq;	/* Smaller of the 2 frequencies (between 0.0 and 0.5) */
     unsigned totalCount;	/* Count of individuals */
     float derivedAlleleFreq;	/* Derived allele frequency */
     };
 
 void hapmapAlleleFreqStaticLoad(char **row, struct hapmapAlleleFreq *ret);
 /* Load a row from hapmapAlleleFreq table into ret.  The contents of ret will
  * be replaced at the next call to this function. */
 
 struct hapmapAlleleFreq *hapmapAlleleFreqLoad(char **row);
 /* Load a hapmapAlleleFreq from row fetched with select * from hapmapAlleleFreq
  * from database.  Dispose of this with hapmapAlleleFreqFree(). */
 
 struct hapmapAlleleFreq *hapmapAlleleFreqLoadAll(char *fileName);
 /* Load all hapmapAlleleFreq from whitespace-separated file.
  * Dispose of this with hapmapAlleleFreqFreeList(). */
 
 struct hapmapAlleleFreq *hapmapAlleleFreqLoadAllByChar(char *fileName, char chopper);
 /* Load all hapmapAlleleFreq from chopper separated file.
  * Dispose of this with hapmapAlleleFreqFreeList(). */
 
 #define hapmapAlleleFreqLoadAllByTab(a) hapmapAlleleFreqLoadAllByChar(a, '\t');
 /* Load all hapmapAlleleFreq from tab separated file.
  * Dispose of this with hapmapAlleleFreqFreeList(). */
 
 struct hapmapAlleleFreq *hapmapAlleleFreqCommaIn(char **pS, struct hapmapAlleleFreq *ret);
 /* Create a hapmapAlleleFreq out of a comma separated string. 
  * This will fill in ret if non-null, otherwise will
  * return a new hapmapAlleleFreq */
 
 void hapmapAlleleFreqFree(struct hapmapAlleleFreq **pEl);
 /* Free a single dynamically allocated hapmapAlleleFreq such as created
  * with hapmapAlleleFreqLoad(). */
 
 void hapmapAlleleFreqFreeList(struct hapmapAlleleFreq **pList);
 /* Free a list of dynamically allocated hapmapAlleleFreq's */
 
 void hapmapAlleleFreqOutput(struct hapmapAlleleFreq *el, FILE *f, char sep, char lastSep);
 /* Print out hapmapAlleleFreq.  Separate fields with sep. Follow last field with lastSep. */
 
 #define hapmapAlleleFreqTabOut(el,f) hapmapAlleleFreqOutput(el,f,'\t','\n');
 /* Print out hapmapAlleleFreq as a line in a tab-separated file. */
 
 #define hapmapAlleleFreqCommaOut(el,f) hapmapAlleleFreqOutput(el,f,',',',');
 /* Print out hapmapAlleleFreq as a comma separated list including final comma. */
 
 /* -------------------------------- End autoSql Generated Code -------------------------------- */
 
 #endif /* HAPMAPALLELEFREQ_H */