e70152e44cc66cc599ff6b699eb8adc07f3e656a kent Sat May 24 21:09:34 2014 -0700 Adding Copyright NNNN Regents of the University of California to all files I believe with reasonable certainty were developed under UCSC employ or as part of Genome Browser copyright assignment. diff --git src/hg/inc/pscreen.h src/hg/inc/pscreen.h index 6e7236f..103c6f3 100644 --- src/hg/inc/pscreen.h +++ src/hg/inc/pscreen.h @@ -1,65 +1,68 @@ /* pscreen.h was originally generated by the autoSql program, which also * generated pscreen.c and pscreen.sql. This header links the database and * the RAM representation of objects. */ +/* Copyright (C) 2004 The Regents of the University of California + * See README in this or parent directory for licensing information. */ + #ifndef PSCREEN_H #define PSCREEN_H #define PSCREEN_NUM_COLS 9 struct pscreen /* P-Screen (BDGP Gene Disruption Project) P el. insertion locations/genes */ { struct pscreen *next; /* Next in singly linked list. */ char *chrom; /* chromosome */ unsigned chromStart; /* Start position in chromosome */ unsigned chromEnd; /* End position in chromosome */ char *name; /* Name of item (mutant strain with P el. insert here) */ unsigned score; /* Score from 0-1000 (placeholder! for bed 6 compat) */ char strand[2]; /* + or - */ unsigned stockNumber; /* Mutant strain stock number, for ordering */ unsigned geneCount; /* Number of genes disrupted by this insert */ char **geneIds; /* IDs of genes disrupted */ }; struct pscreen *pscreenLoad(char **row); /* Load a pscreen from row fetched with select * from pscreen * from database. Dispose of this with pscreenFree(). */ struct pscreen *pscreenLoadAll(char *fileName); /* Load all pscreen from whitespace-separated file. * Dispose of this with pscreenFreeList(). */ struct pscreen *pscreenLoadAllByChar(char *fileName, char chopper); /* Load all pscreen from chopper separated file. * Dispose of this with pscreenFreeList(). */ #define pscreenLoadAllByTab(a) pscreenLoadAllByChar(a, '\t'); /* Load all pscreen from tab separated file. * Dispose of this with pscreenFreeList(). */ struct pscreen *pscreenCommaIn(char **pS, struct pscreen *ret); /* Create a pscreen out of a comma separated string. * This will fill in ret if non-null, otherwise will * return a new pscreen */ void pscreenFree(struct pscreen **pEl); /* Free a single dynamically allocated pscreen such as created * with pscreenLoad(). */ void pscreenFreeList(struct pscreen **pList); /* Free a list of dynamically allocated pscreen's */ void pscreenOutput(struct pscreen *el, FILE *f, char sep, char lastSep); /* Print out pscreen. Separate fields with sep. Follow last field with lastSep. */ #define pscreenTabOut(el,f) pscreenOutput(el,f,'\t','\n'); /* Print out pscreen as a line in a tab-separated file. */ #define pscreenCommaOut(el,f) pscreenOutput(el,f,',',','); /* Print out pscreen as a comma separated list including final comma. */ /* -------------------------------- End autoSql Generated Code -------------------------------- */ #endif /* PSCREEN_H */