e70152e44cc66cc599ff6b699eb8adc07f3e656a
kent
  Sat May 24 21:09:34 2014 -0700
Adding Copyright NNNN Regents of the University of California to all files I believe with reasonable certainty were developed under UCSC employ or as part of Genome Browser copyright assignment.
diff --git src/hg/lib/bdgpExprLink.c src/hg/lib/bdgpExprLink.c
index a549ca6..0f447dd 100644
--- src/hg/lib/bdgpExprLink.c
+++ src/hg/lib/bdgpExprLink.c
@@ -1,168 +1,171 @@
 /* bdgpExprLink.c was originally generated by the autoSql program, which also 
  * generated bdgpExprLink.h and bdgpExprLink.sql.  This module links the database and
  * the RAM representation of objects. */
 
+/* Copyright (C) 2014 The Regents of the University of California 
+ * See README in this or parent directory for licensing information. */
+
 #include "common.h"
 #include "linefile.h"
 #include "dystring.h"
 #include "jksql.h"
 #include "bdgpExprLink.h"
 
 
 void bdgpExprLinkStaticLoad(char **row, struct bdgpExprLink *ret)
 /* Load a row from bdgpExprLink table into ret.  The contents of ret will
  * be replaced at the next call to this function. */
 {
 ret->symbol = row[0];
 ret->bdgpName = row[1];
 ret->flyBaseId = row[2];
 ret->est = row[3];
 ret->imageCount = sqlSigned(row[4]);
 ret->bodyPartCount = sqlSigned(row[5]);
 ret->plate = row[6];
 ret->platePos = sqlSigned(row[7]);
 ret->newRelease = row[8][0];
 }
 
 struct bdgpExprLink *bdgpExprLinkLoad(char **row)
 /* Load a bdgpExprLink from row fetched with select * from bdgpExprLink
  * from database.  Dispose of this with bdgpExprLinkFree(). */
 {
 struct bdgpExprLink *ret;
 
 AllocVar(ret);
 ret->symbol = cloneString(row[0]);
 ret->bdgpName = cloneString(row[1]);
 ret->flyBaseId = cloneString(row[2]);
 ret->est = cloneString(row[3]);
 ret->imageCount = sqlSigned(row[4]);
 ret->bodyPartCount = sqlSigned(row[5]);
 ret->plate = cloneString(row[6]);
 ret->platePos = sqlSigned(row[7]);
 ret->newRelease = row[8][0];
 return ret;
 }
 
 struct bdgpExprLink *bdgpExprLinkLoadAll(char *fileName) 
 /* Load all bdgpExprLink from a whitespace-separated file.
  * Dispose of this with bdgpExprLinkFreeList(). */
 {
 struct bdgpExprLink *list = NULL, *el;
 struct lineFile *lf = lineFileOpen(fileName, TRUE);
 char *row[9];
 
 while (lineFileRow(lf, row))
     {
     el = bdgpExprLinkLoad(row);
     slAddHead(&list, el);
     }
 lineFileClose(&lf);
 slReverse(&list);
 return list;
 }
 
 struct bdgpExprLink *bdgpExprLinkLoadAllByChar(char *fileName, char chopper) 
 /* Load all bdgpExprLink from a chopper separated file.
  * Dispose of this with bdgpExprLinkFreeList(). */
 {
 struct bdgpExprLink *list = NULL, *el;
 struct lineFile *lf = lineFileOpen(fileName, TRUE);
 char *row[9];
 
 while (lineFileNextCharRow(lf, chopper, row, ArraySize(row)))
     {
     el = bdgpExprLinkLoad(row);
     slAddHead(&list, el);
     }
 lineFileClose(&lf);
 slReverse(&list);
 return list;
 }
 
 struct bdgpExprLink *bdgpExprLinkCommaIn(char **pS, struct bdgpExprLink *ret)
 /* Create a bdgpExprLink out of a comma separated string. 
  * This will fill in ret if non-null, otherwise will
  * return a new bdgpExprLink */
 {
 char *s = *pS;
 
 if (ret == NULL)
     AllocVar(ret);
 ret->symbol = sqlStringComma(&s);
 ret->bdgpName = sqlStringComma(&s);
 ret->flyBaseId = sqlStringComma(&s);
 ret->est = sqlStringComma(&s);
 ret->imageCount = sqlSignedComma(&s);
 ret->bodyPartCount = sqlSignedComma(&s);
 ret->plate = sqlStringComma(&s);
 ret->platePos = sqlSignedComma(&s);
 sqlFixedStringComma(&s, &(ret->newRelease), sizeof(ret->newRelease));
 *pS = s;
 return ret;
 }
 
 void bdgpExprLinkFree(struct bdgpExprLink **pEl)
 /* Free a single dynamically allocated bdgpExprLink such as created
  * with bdgpExprLinkLoad(). */
 {
 struct bdgpExprLink *el;
 
 if ((el = *pEl) == NULL) return;
 freeMem(el->symbol);
 freeMem(el->bdgpName);
 freeMem(el->flyBaseId);
 freeMem(el->est);
 freeMem(el->plate);
 freez(pEl);
 }
 
 void bdgpExprLinkFreeList(struct bdgpExprLink **pList)
 /* Free a list of dynamically allocated bdgpExprLink's */
 {
 struct bdgpExprLink *el, *next;
 
 for (el = *pList; el != NULL; el = next)
     {
     next = el->next;
     bdgpExprLinkFree(&el);
     }
 *pList = NULL;
 }
 
 void bdgpExprLinkOutput(struct bdgpExprLink *el, FILE *f, char sep, char lastSep) 
 /* Print out bdgpExprLink.  Separate fields with sep. Follow last field with lastSep. */
 {
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->symbol);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->bdgpName);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->flyBaseId);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->est);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 fprintf(f, "%d", el->imageCount);
 fputc(sep,f);
 fprintf(f, "%d", el->bodyPartCount);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->plate);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 fprintf(f, "%d", el->platePos);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%c", el->newRelease);
 if (sep == ',') fputc('"',f);
 fputc(lastSep,f);
 }
 
 /* -------------------------------- End autoSql Generated Code -------------------------------- */