e70152e44cc66cc599ff6b699eb8adc07f3e656a
kent
  Sat May 24 21:09:34 2014 -0700
Adding Copyright NNNN Regents of the University of California to all files I believe with reasonable certainty were developed under UCSC employ or as part of Genome Browser copyright assignment.
diff --git src/hg/lib/bdgpGeneInfo.c src/hg/lib/bdgpGeneInfo.c
index fd45537..e77aa4c 100644
--- src/hg/lib/bdgpGeneInfo.c
+++ src/hg/lib/bdgpGeneInfo.c
@@ -1,155 +1,158 @@
 /* bdgpGeneInfo.c was originally generated by the autoSql program, which also 
  * generated bdgpGeneInfo.h and bdgpGeneInfo.sql.  This module links the database and
  * the RAM representation of objects. */
 
+/* Copyright (C) 2014 The Regents of the University of California 
+ * See README in this or parent directory for licensing information. */
+
 #include "common.h"
 #include "linefile.h"
 #include "dystring.h"
 #include "jksql.h"
 #include "bdgpGeneInfo.h"
 
 
 void bdgpGeneInfoStaticLoad(char **row, struct bdgpGeneInfo *ret)
 /* Load a row from bdgpGeneInfo table into ret.  The contents of ret will
  * be replaced at the next call to this function. */
 {
 
 ret->bdgpName = row[0];
 ret->flyBaseId = row[1];
 ret->go = row[2];
 ret->symbol = row[3];
 ret->cytorange = row[4];
 ret->cdna_clone = row[5];
 }
 
 struct bdgpGeneInfo *bdgpGeneInfoLoad(char **row)
 /* Load a bdgpGeneInfo from row fetched with select * from bdgpGeneInfo
  * from database.  Dispose of this with bdgpGeneInfoFree(). */
 {
 struct bdgpGeneInfo *ret;
 
 AllocVar(ret);
 ret->bdgpName = cloneString(row[0]);
 ret->flyBaseId = cloneString(row[1]);
 ret->go = cloneString(row[2]);
 ret->symbol = cloneString(row[3]);
 ret->cytorange = cloneString(row[4]);
 ret->cdna_clone = cloneString(row[5]);
 return ret;
 }
 
 struct bdgpGeneInfo *bdgpGeneInfoLoadAll(char *fileName) 
 /* Load all bdgpGeneInfo from a whitespace-separated file.
  * Dispose of this with bdgpGeneInfoFreeList(). */
 {
 struct bdgpGeneInfo *list = NULL, *el;
 struct lineFile *lf = lineFileOpen(fileName, TRUE);
 char *row[6];
 
 while (lineFileRow(lf, row))
     {
     el = bdgpGeneInfoLoad(row);
     slAddHead(&list, el);
     }
 lineFileClose(&lf);
 slReverse(&list);
 return list;
 }
 
 struct bdgpGeneInfo *bdgpGeneInfoLoadAllByChar(char *fileName, char chopper) 
 /* Load all bdgpGeneInfo from a chopper separated file.
  * Dispose of this with bdgpGeneInfoFreeList(). */
 {
 struct bdgpGeneInfo *list = NULL, *el;
 struct lineFile *lf = lineFileOpen(fileName, TRUE);
 char *row[6];
 
 while (lineFileNextCharRow(lf, chopper, row, ArraySize(row)))
     {
     el = bdgpGeneInfoLoad(row);
     slAddHead(&list, el);
     }
 lineFileClose(&lf);
 slReverse(&list);
 return list;
 }
 
 struct bdgpGeneInfo *bdgpGeneInfoCommaIn(char **pS, struct bdgpGeneInfo *ret)
 /* Create a bdgpGeneInfo out of a comma separated string. 
  * This will fill in ret if non-null, otherwise will
  * return a new bdgpGeneInfo */
 {
 char *s = *pS;
 
 if (ret == NULL)
     AllocVar(ret);
 ret->bdgpName = sqlStringComma(&s);
 ret->flyBaseId = sqlStringComma(&s);
 ret->go = sqlStringComma(&s);
 ret->symbol = sqlStringComma(&s);
 ret->cytorange = sqlStringComma(&s);
 ret->cdna_clone = sqlStringComma(&s);
 *pS = s;
 return ret;
 }
 
 void bdgpGeneInfoFree(struct bdgpGeneInfo **pEl)
 /* Free a single dynamically allocated bdgpGeneInfo such as created
  * with bdgpGeneInfoLoad(). */
 {
 struct bdgpGeneInfo *el;
 
 if ((el = *pEl) == NULL) return;
 freeMem(el->bdgpName);
 freeMem(el->flyBaseId);
 freeMem(el->go);
 freeMem(el->symbol);
 freeMem(el->cytorange);
 freeMem(el->cdna_clone);
 freez(pEl);
 }
 
 void bdgpGeneInfoFreeList(struct bdgpGeneInfo **pList)
 /* Free a list of dynamically allocated bdgpGeneInfo's */
 {
 struct bdgpGeneInfo *el, *next;
 
 for (el = *pList; el != NULL; el = next)
     {
     next = el->next;
     bdgpGeneInfoFree(&el);
     }
 *pList = NULL;
 }
 
 void bdgpGeneInfoOutput(struct bdgpGeneInfo *el, FILE *f, char sep, char lastSep) 
 /* Print out bdgpGeneInfo.  Separate fields with sep. Follow last field with lastSep. */
 {
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->bdgpName);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->flyBaseId);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->go);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->symbol);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->cytorange);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->cdna_clone);
 if (sep == ',') fputc('"',f);
 fputc(lastSep,f);
 }
 
 /* -------------------------------- End autoSql Generated Code -------------------------------- */