e70152e44cc66cc599ff6b699eb8adc07f3e656a kent Sat May 24 21:09:34 2014 -0700 Adding Copyright NNNN Regents of the University of California to all files I believe with reasonable certainty were developed under UCSC employ or as part of Genome Browser copyright assignment. diff --git src/hg/lib/cddDesc.c src/hg/lib/cddDesc.c index 055ac07..d581cb4 100644 --- src/hg/lib/cddDesc.c +++ src/hg/lib/cddDesc.c @@ -1,149 +1,152 @@ /* cddDesc.c was originally generated by the autoSql program, which also * generated cddDesc.h and cddDesc.sql. This module links the database and * the RAM representation of objects. */ +/* Copyright (C) 2014 The Regents of the University of California + * See README in this or parent directory for licensing information. */ + #include "common.h" #include "linefile.h" #include "dystring.h" #include "jksql.h" #include "cddDesc.h" void cddDescStaticLoad(char **row, struct cddDesc *ret) /* Load a row from cddDesc table into ret. The contents of ret will * be replaced at the next call to this function. */ { ret->cddid = sqlUnsigned(row[0]); ret->accession = row[1]; ret->cddname = row[2]; ret->name = row[3]; ret->cdddesc = row[4]; ret->cddlength = sqlUnsigned(row[5]); } struct cddDesc *cddDescLoad(char **row) /* Load a cddDesc from row fetched with select * from cddDesc * from database. Dispose of this with cddDescFree(). */ { struct cddDesc *ret; AllocVar(ret); ret->cddid = sqlUnsigned(row[0]); ret->accession = cloneString(row[1]); ret->cddname = cloneString(row[2]); ret->name = cloneString(row[3]); ret->cdddesc = cloneString(row[4]); ret->cddlength = sqlUnsigned(row[5]); return ret; } struct cddDesc *cddDescLoadAll(char *fileName) /* Load all cddDesc from a whitespace-separated file. * Dispose of this with cddDescFreeList(). */ { struct cddDesc *list = NULL, *el; struct lineFile *lf = lineFileOpen(fileName, TRUE); char *row[6]; while (lineFileRow(lf, row)) { el = cddDescLoad(row); slAddHead(&list, el); } lineFileClose(&lf); slReverse(&list); return list; } struct cddDesc *cddDescLoadAllByChar(char *fileName, char chopper) /* Load all cddDesc from a chopper separated file. * Dispose of this with cddDescFreeList(). */ { struct cddDesc *list = NULL, *el; struct lineFile *lf = lineFileOpen(fileName, TRUE); char *row[6]; while (lineFileNextCharRow(lf, chopper, row, ArraySize(row))) { el = cddDescLoad(row); slAddHead(&list, el); } lineFileClose(&lf); slReverse(&list); return list; } struct cddDesc *cddDescCommaIn(char **pS, struct cddDesc *ret) /* Create a cddDesc out of a comma separated string. * This will fill in ret if non-null, otherwise will * return a new cddDesc */ { char *s = *pS; if (ret == NULL) AllocVar(ret); ret->cddid = sqlUnsignedComma(&s); ret->accession = sqlStringComma(&s); ret->cddname = sqlStringComma(&s); ret->name = sqlStringComma(&s); ret->cdddesc = sqlStringComma(&s); ret->cddlength = sqlUnsignedComma(&s); *pS = s; return ret; } void cddDescFree(struct cddDesc **pEl) /* Free a single dynamically allocated cddDesc such as created * with cddDescLoad(). */ { struct cddDesc *el; if ((el = *pEl) == NULL) return; freeMem(el->accession); freeMem(el->cddname); freeMem(el->name); freeMem(el->cdddesc); freez(pEl); } void cddDescFreeList(struct cddDesc **pList) /* Free a list of dynamically allocated cddDesc's */ { struct cddDesc *el, *next; for (el = *pList; el != NULL; el = next) { next = el->next; cddDescFree(&el); } *pList = NULL; } void cddDescOutput(struct cddDesc *el, FILE *f, char sep, char lastSep) /* Print out cddDesc. Separate fields with sep. Follow last field with lastSep. */ { fprintf(f, "%u", el->cddid); fputc(sep,f); if (sep == ',') fputc('"',f); fprintf(f, "%s", el->accession); if (sep == ',') fputc('"',f); fputc(sep,f); if (sep == ',') fputc('"',f); fprintf(f, "%s", el->cddname); if (sep == ',') fputc('"',f); fputc(sep,f); if (sep == ',') fputc('"',f); fprintf(f, "%s", el->name); if (sep == ',') fputc('"',f); fputc(sep,f); if (sep == ',') fputc('"',f); fprintf(f, "%s", el->cdddesc); if (sep == ',') fputc('"',f); fputc(sep,f); fprintf(f, "%u", el->cddlength); fputc(lastSep,f); } /* -------------------------------- End autoSql Generated Code -------------------------------- */