e70152e44cc66cc599ff6b699eb8adc07f3e656a kent Sat May 24 21:09:34 2014 -0700 Adding Copyright NNNN Regents of the University of California to all files I believe with reasonable certainty were developed under UCSC employ or as part of Genome Browser copyright assignment. diff --git src/hg/lib/cnpSebat2.c src/hg/lib/cnpSebat2.c index 9775f0a..e310ee6 100644 --- src/hg/lib/cnpSebat2.c +++ src/hg/lib/cnpSebat2.c @@ -1,138 +1,141 @@ /* cnpSebat2.c was originally generated by the autoSql program, which also * generated cnpSebat2.h and cnpSebat2.sql. This module links the database and * the RAM representation of objects. */ +/* Copyright (C) 2014 The Regents of the University of California + * See README in this or parent directory for licensing information. */ + #include "common.h" #include "linefile.h" #include "dystring.h" #include "jksql.h" #include "cnpSebat2.h" void cnpSebat2StaticLoad(char **row, struct cnpSebat2 *ret) /* Load a row from cnpSebat2 table into ret. The contents of ret will * be replaced at the next call to this function. */ { ret->chrom = row[0]; ret->chromStart = sqlUnsigned(row[1]); ret->chromEnd = sqlUnsigned(row[2]); ret->name = row[3]; ret->probes = sqlUnsigned(row[4]); } struct cnpSebat2 *cnpSebat2Load(char **row) /* Load a cnpSebat2 from row fetched with select * from cnpSebat2 * from database. Dispose of this with cnpSebat2Free(). */ { struct cnpSebat2 *ret; AllocVar(ret); ret->chrom = cloneString(row[0]); ret->chromStart = sqlUnsigned(row[1]); ret->chromEnd = sqlUnsigned(row[2]); ret->name = cloneString(row[3]); ret->probes = sqlUnsigned(row[4]); return ret; } struct cnpSebat2 *cnpSebat2LoadAll(char *fileName) /* Load all cnpSebat2 from a whitespace-separated file. * Dispose of this with cnpSebat2FreeList(). */ { struct cnpSebat2 *list = NULL, *el; struct lineFile *lf = lineFileOpen(fileName, TRUE); char *row[5]; while (lineFileRow(lf, row)) { el = cnpSebat2Load(row); slAddHead(&list, el); } lineFileClose(&lf); slReverse(&list); return list; } struct cnpSebat2 *cnpSebat2LoadAllByChar(char *fileName, char chopper) /* Load all cnpSebat2 from a chopper separated file. * Dispose of this with cnpSebat2FreeList(). */ { struct cnpSebat2 *list = NULL, *el; struct lineFile *lf = lineFileOpen(fileName, TRUE); char *row[5]; while (lineFileNextCharRow(lf, chopper, row, ArraySize(row))) { el = cnpSebat2Load(row); slAddHead(&list, el); } lineFileClose(&lf); slReverse(&list); return list; } struct cnpSebat2 *cnpSebat2CommaIn(char **pS, struct cnpSebat2 *ret) /* Create a cnpSebat2 out of a comma separated string. * This will fill in ret if non-null, otherwise will * return a new cnpSebat2 */ { char *s = *pS; if (ret == NULL) AllocVar(ret); ret->chrom = sqlStringComma(&s); ret->chromStart = sqlUnsignedComma(&s); ret->chromEnd = sqlUnsignedComma(&s); ret->name = sqlStringComma(&s); ret->probes = sqlUnsignedComma(&s); *pS = s; return ret; } void cnpSebat2Free(struct cnpSebat2 **pEl) /* Free a single dynamically allocated cnpSebat2 such as created * with cnpSebat2Load(). */ { struct cnpSebat2 *el; if ((el = *pEl) == NULL) return; freeMem(el->chrom); freeMem(el->name); freez(pEl); } void cnpSebat2FreeList(struct cnpSebat2 **pList) /* Free a list of dynamically allocated cnpSebat2's */ { struct cnpSebat2 *el, *next; for (el = *pList; el != NULL; el = next) { next = el->next; cnpSebat2Free(&el); } *pList = NULL; } void cnpSebat2Output(struct cnpSebat2 *el, FILE *f, char sep, char lastSep) /* Print out cnpSebat2. Separate fields with sep. Follow last field with lastSep. */ { if (sep == ',') fputc('"',f); fprintf(f, "%s", el->chrom); if (sep == ',') fputc('"',f); fputc(sep,f); fprintf(f, "%u", el->chromStart); fputc(sep,f); fprintf(f, "%u", el->chromEnd); fputc(sep,f); if (sep == ',') fputc('"',f); fprintf(f, "%s", el->name); if (sep == ',') fputc('"',f); fputc(sep,f); fprintf(f, "%u", el->probes); fputc(lastSep,f); } /* -------------------------------- End autoSql Generated Code -------------------------------- */