e70152e44cc66cc599ff6b699eb8adc07f3e656a
kent
  Sat May 24 21:09:34 2014 -0700
Adding Copyright NNNN Regents of the University of California to all files I believe with reasonable certainty were developed under UCSC employ or as part of Genome Browser copyright assignment.
diff --git src/hg/lib/dv.c src/hg/lib/dv.c
index 5c0f7ee..6e0731b 100644
--- src/hg/lib/dv.c
+++ src/hg/lib/dv.c
@@ -1,157 +1,160 @@
 /* dv.c was originally generated by the autoSql program, which also 
  * generated dv.h and dv.sql.  This module links the database and
  * the RAM representation of objects. */
 
+/* Copyright (C) 2014 The Regents of the University of California 
+ * See README in this or parent directory for licensing information. */
+
 #include "common.h"
 #include "linefile.h"
 #include "dystring.h"
 #include "jksql.h"
 #include "dv.h"
 
 
 void dvStaticLoad(char **row, struct dv *ret)
 /* Load a row from dv table into ret.  The contents of ret will
  * be replaced at the next call to this function. */
 {
 
 ret->spID = row[0];
 ret->start = sqlUnsigned(row[1]);
 ret->len = sqlUnsigned(row[2]);
 ret->orig = row[3];
 ret->variant = row[4];
 ret->varId = row[5];
 ret->varStatus = row[6];
 }
 
 struct dv *dvLoad(char **row)
 /* Load a dv from row fetched with select * from dv
  * from database.  Dispose of this with dvFree(). */
 {
 struct dv *ret;
 
 AllocVar(ret);
 ret->spID = cloneString(row[0]);
 ret->start = sqlUnsigned(row[1]);
 ret->len = sqlUnsigned(row[2]);
 ret->orig = cloneString(row[3]);
 ret->variant = cloneString(row[4]);
 ret->varId = cloneString(row[5]);
 ret->varStatus = cloneString(row[6]);
 return ret;
 }
 
 struct dv *dvLoadAll(char *fileName) 
 /* Load all dv from a whitespace-separated file.
  * Dispose of this with dvFreeList(). */
 {
 struct dv *list = NULL, *el;
 struct lineFile *lf = lineFileOpen(fileName, TRUE);
 char *row[7];
 
 while (lineFileRow(lf, row))
     {
     el = dvLoad(row);
     slAddHead(&list, el);
     }
 lineFileClose(&lf);
 slReverse(&list);
 return list;
 }
 
 struct dv *dvLoadAllByChar(char *fileName, char chopper) 
 /* Load all dv from a chopper separated file.
  * Dispose of this with dvFreeList(). */
 {
 struct dv *list = NULL, *el;
 struct lineFile *lf = lineFileOpen(fileName, TRUE);
 char *row[7];
 
 while (lineFileNextCharRow(lf, chopper, row, ArraySize(row)))
     {
     el = dvLoad(row);
     slAddHead(&list, el);
     }
 lineFileClose(&lf);
 slReverse(&list);
 return list;
 }
 
 struct dv *dvCommaIn(char **pS, struct dv *ret)
 /* Create a dv out of a comma separated string. 
  * This will fill in ret if non-null, otherwise will
  * return a new dv */
 {
 char *s = *pS;
 
 if (ret == NULL)
     AllocVar(ret);
 ret->spID = sqlStringComma(&s);
 ret->start = sqlUnsignedComma(&s);
 ret->len = sqlUnsignedComma(&s);
 ret->orig = sqlStringComma(&s);
 ret->variant = sqlStringComma(&s);
 ret->varId = sqlStringComma(&s);
 ret->varStatus = sqlStringComma(&s);
 *pS = s;
 return ret;
 }
 
 void dvFree(struct dv **pEl)
 /* Free a single dynamically allocated dv such as created
  * with dvLoad(). */
 {
 struct dv *el;
 
 if ((el = *pEl) == NULL) return;
 freeMem(el->spID);
 freeMem(el->orig);
 freeMem(el->variant);
 freeMem(el->varId);
 freeMem(el->varStatus);
 freez(pEl);
 }
 
 void dvFreeList(struct dv **pList)
 /* Free a list of dynamically allocated dv's */
 {
 struct dv *el, *next;
 
 for (el = *pList; el != NULL; el = next)
     {
     next = el->next;
     dvFree(&el);
     }
 *pList = NULL;
 }
 
 void dvOutput(struct dv *el, FILE *f, char sep, char lastSep) 
 /* Print out dv.  Separate fields with sep. Follow last field with lastSep. */
 {
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->spID);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 fprintf(f, "%u", el->start);
 fputc(sep,f);
 fprintf(f, "%u", el->len);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->orig);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->variant);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->varId);
 if (sep == ',') fputc('"',f);
 fputc(sep,f);
 if (sep == ',') fputc('"',f);
 fprintf(f, "%s", el->varStatus);
 if (sep == ',') fputc('"',f);
 fputc(lastSep,f);
 }
 
 /* -------------------------------- End autoSql Generated Code -------------------------------- */